Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08- 21] 197 sequences; 18,111,965 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq185 104 2e-17 seq190 91.5 1e-13 >seq185 Length=548418 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || ||||| ||| || || || || || |||| |||||| || |||| || ||||| Sbjct 360615 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGTGTGCGGCCGTCCTCGAGCTGC 360674 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| ||||| || || ||||||||||||| ||| | | ||| |||||| ||| || Sbjct 360675 TTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTG 360734 Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| ||| | | | || || |||||| || || | ||||| | || ||||| Sbjct 360735 GCCTTGA-CGTTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGT 360793 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 |||||| || || ||||| ||||| Sbjct 360794 CAGCGTCTTGACGAAGATCTGCAT 360817 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || | ||| || || |||| || ||||| || || || || Sbjct 282503 CTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAA 282444 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 ||||| ||||||||||| | ||| | || ||| |||||| ||| || |||| ||| Sbjct 282443 GATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 282385 Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | || || |||||||| || | ||||| | || ||||| || || || | Sbjct 282384 TGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTACCCGTAAGGGTCTTGA 282325 Query 39272 CAAAGATTTGCATCTT 39287 ||||||| |||||||| Sbjct 282324 CAAAGATCTGCATCTT 282309 >seq190 Length=701213 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || ||||||||||| || || || || || || | ||| || || | || || ||||| Sbjct 552488 TGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCGAGCTGC 552429 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| ||||| || |||||||||||||| | || | | ||| |||||| || || Sbjct 552428 TTGCCGGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGAATCTTG 552369 Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| ||| | | | ||| || |||||| || || | ||||| | ||||| || Sbjct 552368 GCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATCGTCTTTCCAGT 552310 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || || || ||||| Sbjct 552309 GAGCGTCTTGACGAAAATCTGCAT 552286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429544568687861