Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08-
21] 197 sequences; 18,111,965 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq185 104 2e-17
seq190 91.5 1e-13
>seq185
Length=548418
Score = 104 bits (114), Expect = 2e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| ||||| ||| || || || || || |||| |||||| || |||| || |||||
Sbjct 360615 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGTGTGCGGCCGTCCTCGAGCTGC 360674
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
||||| ||||| || || ||||||||||||| ||| | | ||| |||||| ||| ||
Sbjct 360675 TTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTG 360734
Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260
|||| ||| | | | || || |||||| || || | ||||| | || |||||
Sbjct 360735 GCCTTGA-CGTTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGT 360793
Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284
|||||| || || ||||| |||||
Sbjct 360794 CAGCGTCTTGACGAAGATCTGCAT 360817
Score = 89.7 bits (98), Expect = 4e-13
Identities = 139/196 (71%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152
||| || || || || || || | ||| || || |||| || ||||| || || || ||
Sbjct 282503 CTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAA 282444
Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212
||||| ||||||||||| | ||| | || ||| |||||| ||| || |||| |||
Sbjct 282443 GATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 282385
Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271
| | | || || |||||||| || | ||||| | || ||||| || || || |
Sbjct 282384 TGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTACCCGTAAGGGTCTTGA 282325
Query 39272 CAAAGATTTGCATCTT 39287
||||||| ||||||||
Sbjct 282324 CAAAGATCTGCATCTT 282309
>seq190
Length=701213
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| ||||||||||| || || || || || || | ||| || || | || || |||||
Sbjct 552488 TGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCGAGCTGC 552429
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
||||| ||||| || |||||||||||||| | || | | ||| |||||| || ||
Sbjct 552428 TTGCCGGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGAATCTTG 552369
Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260
|||| ||| | | | ||| || |||||| || || | ||||| | ||||| ||
Sbjct 552368 GCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATCGTCTTTCCAGT 552310
Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284
||||| || || || || |||||
Sbjct 552309 GAGCGTCTTGACGAAAATCTGCAT 552286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429544568687861
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |