Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08- 21] 197 sequences; 18,111,965 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq190 107 1e-18 seq185 95.1 8e-15 >seq190 Length=701213 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || ||||| ||||| |||||||||||||| || || || || Sbjct 552286 ATGCAGATTTTCGTCAAGACGCTCACTGGAAAGACGATCACTCTCGAGGTCGAGTCGTCG 552345 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| ||||| || ||| | || || || || Sbjct 552346 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAG 552405 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || ||||||||||| || || || || | |||||| | || |||||| Sbjct 552406 CAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCGGACTACAAC 552465 Query 23791 ATACAAAAAGAG 23802 || || || ||| Sbjct 552466 ATCCAGAAGGAG 552477 >seq185 Length=548418 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || || ||||| || |||||||| ||||| || || || || Sbjct 360817 ATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 360758 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||| || ||| | || || || || Sbjct 360757 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 360698 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || ||||||||||| || || || |||| ||||| | ||| |||||| Sbjct 360697 CAGCGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACACTTTCCGACTACAAC 360638 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 360637 ATCCAGAAGGAGTCGAC 360621 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || ||||| || ||||| ||||| ||||| || || ||| || Sbjct 361045 ATGCAGATCTTTGTCAAGACTCTCACTGGCAAAACCATCACCCTCGAGGTCGAGTCCTCG 360986 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | || | || | | ||||| || ||| | || || || || Sbjct 360985 GATACCATTGACAATGTCAAGGCCAAGA-TCCAGGACAAGGAGGGTATTCCCCCCGACCA 360927 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || ||||||||||| || || || || | |||||| | || ||||| Sbjct 360926 GCAGCGCCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTGTCGGACTACAA 360867 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 360866 CATCCAGAAGGAGTCTAC 360849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008788460076