Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08- 21] 197 sequences; 18,111,965 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq190 147 5e-30 seq185 140 8e-28 seq191 114 3e-20 >seq190 Length=701213 Score = 147 bits (162), Expect = 5e-30 Identities = 165/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | |||||| |||||||| ||||| || || || | ||||| || | || || Sbjct 552050 CGGAGACGCAGGACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGACAGGGTG 551991 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | |||||||| |||||||| || || ||||| || || || |||||||| ||||| ||| Sbjct 551990 CGGCCATCTTCGAGCTGCTTTCCCGCAAAGATGAGGCGCTGCTGGTCGGGAGGAATGCCT 551931 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| |||||||| ||| ||| ||||| ||||| || | || || || | Sbjct 551930 TCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCGAGG 551871 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| ||||| || || | ||| | ||||| Sbjct 551870 GTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 551830 Score = 104 bits (114), Expect = 6e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || ||||| || ||| || || |||| ||||| || | | ||| Sbjct 552507 ACGCAGACGCAGCACGAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGT 552448 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || || ||||| || || || ||||| || || ||||| Sbjct 552447 GCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACC 552388 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| ||| || ||||| ||||| || | || || || | Sbjct 552387 CTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAG 552328 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||| || || | || || | ||| | ||||| Sbjct 552327 AGTGATCGTCTTTCCAGTGAGCGTCTTGACGAAAATCTGCAT 552286 >seq185 Length=548418 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || |||||||| || || || || |||| ||||| |||| | || Sbjct 360596 ACGCAGACGCAGCACTAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGTGT 360655 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| || || ||||| || || || |||||||| |||||||| Sbjct 360656 GCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATACC 360715 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || ||||||||||| || | || || || | Sbjct 360716 CTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAG 360775 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||||||||||| || || | ||| | ||||| Sbjct 360776 GGTGATCGTCTTGCCCGTCAGCGTCTTGACGAAGATCTGCAT 360817 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||||||||| || || || |||| ||||| || | || ||| | ||||| Sbjct 360834 AGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGACAGAGTGCGGCCATCC 360893 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || || || |||||||| |||||||| |||||||| Sbjct 360894 TCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCC 360953 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| || ||||| || |||| || || || | ||||| || Sbjct 360954 TGGATCTTGGCCTTGACATTGTCAATGGTATCCGAGGACTCGACCTCGAGGGTGATGGTT 361013 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| || | ||| || Sbjct 361014 TTGCCAGTGAGAGTCTT 361030 Score = 114 bits (126), Expect = 3e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| || || || || |||| ||||| || | | || | || || Sbjct 282523 AGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCC 282464 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||||||||| || || ||||| || || || || |||||||| Sbjct 282463 TCGAGCTGCTTACCGGCGAAGATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 282404 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || | ||||| || | ||||| ||| Sbjct 282403 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTC 282344 Query 225682 TTGCCCGT 225689 || ||||| Sbjct 282343 TTACCCGT 282336 >seq191 Length=731470 Score = 114 bits (126), Expect = 3e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| || || || || |||| ||||| || | | || | || || Sbjct 493854 AGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCC 493795 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || |||||||| || || || |||||||| Sbjct 493794 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 493735 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| |||| ||||| || | ||||| ||| Sbjct 493734 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGTC 493675 Query 225682 TTGCCCGT 225689 || || || Sbjct 493674 TTACCTGT 493667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192528189976718