Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08- 21] 197 sequences; 18,111,965 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq190 159 8e-34 seq185 141 2e-28 seq191 136 1e-26 >seq190 Length=701213 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| ||||| |||||||| |||||||| || || ||| Sbjct 552289 CAGATTTTCGTCAAGACGCTCACTGGAAAGACGATCACTCTCGAGGTCGAGTCGTCGGAC 552348 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||||||||| || || |||||||| |||||||| Sbjct 552349 ACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAGCAG 552408 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || |||||||| ||||| | |||||| | || || ||| || Sbjct 552409 CGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCGGACTACAACATC 552468 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| || || Sbjct 552469 CAGAAGGAGAGCACGCTGCACCTCGT 552494 Score = 149 bits (164), Expect = 2e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || ||||| || || || || ||||||||||||||||| || ||| Sbjct 551605 CAGATCTTTGTCAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCGGAC 551664 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| ||||| || || ||||||||||| |||||||| Sbjct 551665 ACTATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGAATCCCTCCCGACCAGCAG 551724 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| ||||| |||||||| ||||| | || || | || || ||| || Sbjct 551725 CGTCTCATTTTCGCAGGAAAGCAGCTCGAGGATGGCCGTACCCTCTCGGACTACAACATC 551784 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| || || || || ||| Sbjct 551785 CAGAAGGAATCGACTCTTCACCTCGTT 551811 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || || || || |||||||||||||| || || ||| Sbjct 551833 CAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCGGAC 551892 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| ||||| || ||||| |||||||| Sbjct 551893 ACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCCGACCAGCAG 551952 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || ||||| |||||||||||||| | || || | || || ||| | Sbjct 551953 CGCCTCATCTTTGCGGGAAAGCAGCTCGAAGATGGCCGCACCCTGTCTGACTACAACATT 552012 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 552013 CAGAAGGAGTCCACCCTCCACCTCGT 552038 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || | || || || || ||||| || || || || || || Sbjct 552061 CAGATTTTCGTCAAGACCTTGACTGGCAAGACCATCACGCTGGAAGTCGAGTCTTCCGAT 552120 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || ||||| |||||||| || || ||||| || |||||||| Sbjct 552121 ACCATTGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAG 552180 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||||||||| || || ||||||||||| | || || |||| || ||| || Sbjct 552181 CGATTGATCTTCGCCGGCAAGCAACTCGAAGATGGTCGTACGCTGTCCGACTACAACATC 552240 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||| || Sbjct 552241 CAGAAGGAGAGCACGCTTCATCTCGT 552266 >seq185 Length=548418 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || || || || |||||||| |||||||| || ||| Sbjct 282315 CAGATCTTTGTCAAGACCCTTACGGGTAAGACCATCACCCTTGAGGTGGAGTCTTCGGAC 282374 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || ||||| || |||||||| Sbjct 282375 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAG 282434 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| || |||||||| || || | || ||| | || || ||| || Sbjct 282435 CGCCTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGCACGCTTTCGGACTACAACATC 282494 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 282495 CAGAAGGAGTCGACCCTCCACCTCGT 282520 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || ||||||||||||||||| || || ||| Sbjct 360814 CAGATCTTCGTCAAGACGCTGACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCGGAC 360755 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || || || || |||||||| Sbjct 360754 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAGCAG 360695 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || |||||||| || || | || ||| |||| || ||| || Sbjct 360694 CGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACACTTTCCGACTACAACATC 360635 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 360634 CAGAAGGAGTCGACGCTCCACCTAGT 360609 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || |||||||| || ||||| |||||||||||||| || ||| || Sbjct 361042 CAGATCTTTGTCAAGACTCTCACTGGCAAAACCATCACCCTCGAGGTCGAGTCCTCGGAT 360983 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| ||||| |||||||| || || || || || |||||||| Sbjct 360982 ACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAGCAG 360923 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || |||||||| ||||| | ||||| | || || ||| || Sbjct 360922 CGCCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTGTCGGACTACAACATC 360863 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 360862 CAGAAGGAGTCTACTCTCCACCTCGT 360837 >seq191 Length=731470 Score = 136 bits (150), Expect = 1e-26 Identities = 141/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 ||||| || || |||||||| |||||||| ||| ||||||||||| |||||||| Sbjct 493667 ACAGGTAAGACCATCACCCTTGAGGTGGAGTCCTCGGACACCATCGACAACGTCAAGGCC 493726 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| |||||||| || || ||||| || |||||||| || || ||||||||||| || Sbjct 493727 AAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTCATCTTCGCCGGCAAG 493786 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 |||||||| || || | || || | || || ||| |||| || || || || || || Sbjct 493787 CAGCTCGAGGACGGCCGCACGCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTCCAC 493846 Query 178125 CTTGT 178129 || || Sbjct 493847 CTCGT 493851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203728161707218