Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2123 136 8e-27 seq2416 111 3e-19 >seq2123 Length=425399 Score = 136 bits (150), Expect = 8e-27 Identities = 147/192 (77%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 230428 GACGCTATTCCATGTCGCCTT-ATTGGCATGAACGCTGAACTTATGGGACAGTACATCGA 230486 || ||| | ||| ||| ||| || || |||||||| |||||||| | ||||||||||| Sbjct 271499 GATGCTCTCCCA-GTCAGCTTGATCGGGATGAACGCCAAACTTATGTGTCAGTACATCGA 271441 Query 230487 ATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAA 230546 || || ||||||||| | |||||||| | ||| |||| || || |||||| | ||| Sbjct 271440 GTTTGTCGCCGACCGCCTGCTTGTTGCATTGGGTAACGACAAGGTCTACAACAGCACGAA 271381 Query 230547 CCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCG 230606 |||||| | || ||||| | || ||||| || || |||||||||||||| || ||||| Sbjct 271380 CCCCTTCGACTTCATGGATATGATCTCGCTGCAGGGCAAGACCAACTTCTTTGAGAAGCG 271321 Query 230607 TGTCAGTGACTA 230618 |||| ||||| Sbjct 271320 TGTCTCGGACTA 271309 >seq2416 Length=74831 Score = 111 bits (122), Expect = 3e-19 Identities = 123/164 (75%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || || || ||||||||| | || ||| | ||||||||||| || || ||||||||| | Sbjct 67419 CTCATCGGAATGAACGCTAAGCTCATGTGTCAGTACATCGAGTTTGTTGCCGACCGCCTG 67478 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | ||||| | ||| |||| || | |||||| | |||||||| | || ||||| Sbjct 67479 CTCGTTGCTTTGGGTAACGACAAGATCTACAACAGCACCAACCCCTTCGACTTCATGGAC 67538 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGT 230609 | |||||| | ||||| ||||| ||||||||||| ||||| || Sbjct 67539 ATGATTTCGTTGCAAGGAAAGACAAACTTCTTCGAGAAGCGAGT 67582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057789344032910