Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2416 152 5e-32 seq2123 122 9e-23 >seq2416 Length=74831 Score = 152 bits (168), Expect = 5e-32 Identities = 363/543 (67%), Gaps = 17/543 (3%) Strand=Plus/Minus Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044 |||||||| | |||||| || || || || || ||||| || |||||| ||||| ||| Sbjct 67230 CCCTCGTCACGGCTGATGAGCTCATTGGAGAAGGTCAAGCCAGGCATCAGCCCTCGCTTC 67171 Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104 || | ||| || || |||||||| || || || ||||| || || || || | ||||||| Sbjct 67170 TTCATCCAGAAGATGGCGGCGAATGAACCGGAGAAGAAAATGCCTTCTACCGCTGCAAAC 67111 Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCCATTTCTGCACCCACTC 17163 |||| | ||||| || | || | ||| | ||| |||||| | |||| || Sbjct 67110 GCGACAAGGCGTTCACCGAATGTTGAACGCTTG-TCCGAGATCCATCGGAGAGCCCAGTC 67052 Query 17164 GGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA--ATTTCTCTTTTTCC 17221 || || |||| | ||| || ||||| | || | || | ||| | || || Sbjct 67051 AGCCTTACGCTTGACACAAGGAATGGTTTCAACAGCATCGAAGAGGTGTTCGCGTTGTC- 66993 Query 17222 TGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCC 17281 | |||| | || || || |||||||| ||| ||| | ||||| || || || ||| Sbjct 66992 -GAGGGTCTTTGATGTAGGTGTCGATGAGGAGGGAGTATGTCTCGGAATGAATATTTTCC 66934 Query 17282 ATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAAT 17341 || ||||| || ||||| || || || ||||| || |||||||| |||| Sbjct 66933 ATCATGATCTGGAAACCGTAGAAACAACGCGCTTCGGCGGCCTGAACTTCATTTGAGAAA 66874 Query 17342 CGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGC 17401 |||||| | || |||||||| || |||||||| |||||||| || || | | ||| Sbjct 66873 CGTTCCACGAGGTTTTCGTTAACAATGCCGTCTGAAGCGGCGAAGAAAGCGAGGACATGA 66814 Query 17402 TTAATGAAATATTTTTCGTCCGGTGT-AAGAACGCG------CCAGTCCTTTAAATCTTT 17454 ||||| | || || ||| | | ||| |||||| | || ||||| Sbjct 66813 GAGATGAA----GTGACGCTCGTTGTCATTCATGCGGTTGTTCCAGTCGTGCAAGTCTTT 66758 Query 17455 GGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCA 17514 ||||| ||||| |||||| | ||||| || || |||| ||||| ||||| | ||| Sbjct 66757 GGATAGATCCATTTCTTCCGCAGTCCAGAATGATGCTTCTGCTTTTTTGTACATTTGCCA 66698 Query 17515 AAT 17517 || Sbjct 66697 GAT 66695 >seq2123 Length=425399 Score = 122 bits (134), Expect = 9e-23 Identities = 288/433 (67%), Gaps = 4/433 (1%) Strand=Plus/Plus Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020 || || || |||||| || | |||||||| | ||| || ||||| || || || ||| Sbjct 271643 AGGCAAGCAAAATCGGTGTGCATGCCCTCGTCACGGCTAATGAGTTCATTGGAGAACGTC 271702 Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080 || ||||||||| || || ||||| | ||| || || || ||||||||||| || ||| Sbjct 271703 AATCCGGGCATCAAACCACGCTTCTTCATCCAGAAAATAGCAGCGAACGACCCCGAGAAG 271762 Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTA 17140 || ||||||||||||| || || || | | || || | | ||| | | | | Sbjct 271763 AAGATACCCTCGACGGCAGCGAAGGCAACCAGACGCTCACCAAAGATCGAGCGTGTATCG 271822 Query 17141 CGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCC 17200 |||||| | |||| ||||| || |||| | ||| || ||||| | ||| Sbjct 271823 GAGATCCATCGAAGAGCCCAGTCGGCCTTGCGCTTGACGCAGGGGATGGTTTCAACGGCA 271882 Query 17201 TTAAATA--ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGT 17258 | || | ||| | || | | | || | || || || |||||||| || || Sbjct 271883 TCGAAGAGGTGTTCCCGTTGGCGAGCA--TCTTTAATGTAGGTGTCGATGAGGAGTGAGT 271940 Query 17259 ACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCG 17318 | |||| ||||| ||||||||||| || || || ||||| ||||| || ||||| | Sbjct 271941 ATGTTTCAGAGTGAATGTTCTCCATCATGATTTGGAACCCGTAGAAGCACCGCGCTTCAG 272000 Query 17319 CTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCG 17378 | || ||||| |||| || || | ||||| ||||| || || || || | Sbjct 272001 CAGCCTGCACTTCATTAGAGAAACGCTCGACGAGATTCTCGTTGACAATCCCATCAGAAG 272060 Query 17379 CGGCGAAAAACGC 17391 ||||||| || || Sbjct 272061 CGGCGAAGAATGC 272073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517529057948760