Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq2123 114 2e-20 >seq2123 Length=425399 Score = 114 bits (126), Expect = 2e-20 Identities = 347/533 (65%), Gaps = 6/533 (1%) Strand=Plus/Minus Query 24150 TGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCA 24209 |||| || ||||| | ||| || |||||||||||| | || ||||| ||||| || || Sbjct 273845 TGTAACCCTTCGTCACGACTGATCAATTCGTTGGAATAGGTCAGTCCTGGCATAAGACCT 273786 Query 24210 CGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCC 24269 ||||| || | |||||||||||| ||||| || || || || || ||||| || || || Sbjct 273785 CGCTTCTTTATCCAAAATATGGAAGCAAAGGAGCCGGAGAAAAAGATTCCCTCCACCGCA 273726 Query 24270 GCAAAGGCAATAAGTCTTTCTCCATAACCGG---CGCTGTCATGTATCCACTTTTGAGCC 24326 || || || | | | ||| || || | | || |||||| ||| Sbjct 273725 GCGAAAGCCACCAAACGTTCAGCAAAAGATGTTTGTTTATCCGATATCCAGCGGATTGCC 273666 Query 24327 CAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttt 24386 || || |||||| | | ||||| || || ||||| || | ||| ||||| | | Sbjct 273665 CAGTCAGCCTTCCGTCGGATGCAAGGAATGGTTTCTATCGCGTCAAACAGATATTGCCGT 273606 Query 24387 tCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTT 24446 || | ||||| | || || || || | |||| || || || || |||||| Sbjct 273605 TCGGTTGGGTCTTTGATGTAGGTGTCTATGAGAAGAGAGTATGCCTCGGAGTGGATGTTT 273546 Query 24447 TCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAA 24506 || || ||||| || || || ||||||| || || | | || || || | || Sbjct 273545 TCCATCATAATTTGGAAACCATAAAAACATCGCGCTTCTGCCACTTGCACCTCGTTTGAA 273486 Query 24507 AATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACA 24566 || |||||| ||| || || ||||||||||| || || || || || || | || Sbjct 273485 AACCGTTCTACTAGGTTCTCGTTCACTATTCCATCTGACGCAGCGAAGAAAGCAAGAACC 273426 Query 24567 TGTTTTATAAAATATTTTTC-GTCTGGTGTTA--GTTTATTCCAATCATTGATATCTTTA 24623 | || |||||| ||| | | || | | | | ||||| || | | || ||| Sbjct 273425 CGGGATACGAAATATCGTTCACTGTCGTTTAAACGGTGGTTCCAGTCCATCAAGTCGTTA 273366 Query 24624 GATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 24676 |||| || | |||||| | ||||| ||||| || ||||| ||| ||||| Sbjct 273365 GATAAGTCTATTTCTTCGGCAGTCCAGAATGACGCTTCTGCTCGTTTGTACAT 273313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593702623173360