Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1986 89.7 4e-13 >seq1986 Length=559288 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | |||||| ||||| |||||||| ||||||| Sbjct 253638 CCGCCACGGAGACGGAGGACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCCGAT 253697 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||| ||||| || || ||| |||| | || || ||||| || Sbjct 253698 AGGGTACGACCATCCTCAAGCTGCTTTCCAGCAAAAATCAATCGTTGTTGGTCGGGCGGG 253757 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | ||| || ||| | ||| Sbjct 253758 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTATCGATGGTGTCAGGCGACTCGACC 253817 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||||||||| || | || ||||| || |||||||| Sbjct 253818 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCAT 253864 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || ||||| || || |||||||| || | ||||| || | || || |||||||| || Sbjct 253165 GTCGACTCTTTCTGGATGTTATAATCGGAGAGGGTACGGCCATCTTCGAGCTGTTTTCCA 253224 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| ||||||| | |||||||| ||| | |||||||||||| ||||| || Sbjct 253225 GCAAAAATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGAATCTTGGCCTTT 253284 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | ||| ||| | || || || || |||||||| || Sbjct 253285 ACATTGTCGATGGTGTCCGAAGACTCGACTTCGAGCGTTATCGTTTTTCCGGTTAAAGTC 253344 Query 21159 TTGACAAATATTTGCAT 21175 || || || |||||||| Sbjct 253345 TTCACGAAGATTTGCAT 253361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422246040951812