Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2123 324 1e-83 seq2416 235 6e-57 seq1986 114 1e-20 seq2206 100 3e-16 seq2370 82.4 8e-11 >seq2123 Length=425399 Score = 324 bits (358), Expect = 1e-83 Identities = 426/582 (73%), Gaps = 15/582 (3%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| |||||||| || || |||||||||| ||| ||| |||| ||| Sbjct 272202 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCATTCTGGACCGCCGAAGAGATGGATCTG 272143 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || |||||| | ||||||| | ||| ||||||| |||||||| ||||||||| Sbjct 272142 TCGAAGGACTTGCACGACTGGAACAACCGCATGAACGAAAACGAGCGTCATTTCATCTCA 272083 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || |||||||| || || || |||||||||||||| ||||||||| Sbjct 272082 CACGTCCTCGCATTCTTCGCCGCTTCTGATGGGATTGTCAACGAGAATCTCGTCGAGCGT 272023 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| || | || ||||||| || || ||||||||||||||||| || || ||| ||| Sbjct 272022 TTCTCTAATGAAGTGCAGGCTGCTGAAGCGCGGTGCTTCTACGGGTTCCAAATCATGATG 271963 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT--GCGCTCTTCG- 116929 |||||| | ||||| |||| || || |||||||||||| ||| | | | ||| Sbjct 271962 GAGAACATTCACTCTGAAACATACTCACTCCTCATCGACACCTACATTAAAGATGCTCGC 271903 Query 116930 -GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 | | ||| | || | || | ||| | || || || || |||||||| ||||| Sbjct 271902 CAACGGGAA-CACC---TCTTCGATGCCGTTGAAACCATCCCCTGCGTCAAGCGCAAGGC 271847 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGC-CG-CCTTCGGCGAGCGCCTGGTG 117046 ||| ||||| || || |||||| ||| | | | || || ||| || ||||| ||||| Sbjct 271846 CGACTGGGCTCTTCGATGGATCTCCG--ATACACGCTCGATCTTTGGTGAGCGTCTGGTT 271789 Query 117047 GCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTC 117106 |||||||| ||||||||||| ||||||| ||||| ||||| || || || ||| | Sbjct 271788 GCCTTCGCTGCCGTCGAGGGTATCTTCTTCTCGGGGTCGTTCGCTGCTATTTTCTGGATG 271729 Query 117107 AAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAG 117166 ||||| || || | |||||||| |||| ||| ||| || ||||| | | |||||| Sbjct 271728 AAGAAGCGTGGTTTGATGCCCGGATTGACGTTCTCCAATGAACTCATTAGCCGTGACGAG 271669 Query 117167 GGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTG 117208 || |||| ||| ||||| || | || |||| |||||| Sbjct 271668 GGCATGCACACCGATTTTGCTTGCCTTCTCTTCAGTCATTTG 271627 >seq2416 Length=74831 Score = 235 bits (260), Expect = 6e-57 Identities = 453/658 (69%), Gaps = 15/658 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||||||||| || || || || |||||||| | || || |||| || Sbjct 66695 ATCTGGCAAATGTACAAAAAAGCAGAAGCATCATTCTGGACTGCGGAAGAAATGGATCTA 66754 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||| ||| | ||||||| | ||| |||| ||||||||||| || |||||| Sbjct 66755 TCCAAAGACTTGCACGACTGGAACAACCGCATGAATGACAACGAGCGTCACTTCATCTCT 66814 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || || || || |||||||| |||||||| || ||||| || || || || ||| Sbjct 66815 CATGTCCTCGCTTTCTTCGCCGCTTCAGACGGCATTGTTAACGAAAACCTCGTGGAACGT 66874 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | | || || |||| ||||| ||||| || |||||||| || |||||| ||| Sbjct 66875 TTCTCAAATGAAGTTCAGGCCGCCGAAGCGCGTTGTTTCTACGGTTTCCAGATCATGATG 66934 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT--GCGCTCTTCG- 116929 || || | || || || | || || |||||||||||| ||| | | | ||| Sbjct 66935 GAAAATATTCATTCCGAGACATACTCCCTCCTCATCGACACCTACATCAAAGACCCTCGA 66994 Query 116930 -GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 | | ||| | || | || | || | || || || || || ||||| ||||| Sbjct 66995 CAACGCGAA-CACC---TCTTCGATGCTGTTGAAACCATTCCTTGTGTCAAGCGTAAGGC 67050 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAG-GCCGCCTTCGGCGAGCGCCTGGTGG 117047 || ||||| || || |||||| | | || || | | | ||||| || ||||| || | Sbjct 67051 TGACTGGGCTCTCCGATGGATCTCGGACA-AGCGTTCAACATTCGGTGAACGCCTTGTCG 67109 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 | || || || || || ||| | ||||| || || ||||||||||| || ||| | | Sbjct 67110 CGTTTGCAGCGGTAGAAGGCATTTTCTTCTCCGGTTCATTCGCCGCCATCTTCTGGATGA 67169 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 |||| || || || ||||| ||| |||| ||| ||| ||||||||| | | ||||||| Sbjct 67170 AGAAGCGAGGGCTGATGCCTGGCTTGACCTTCTCCAATGAGCTCATCAGCCGTGACGAGG 67229 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACC-GAGCGCG 117226 | |||| |||||||||||| | || || | || || || || || | | || Sbjct 67230 GCATGCACACCGACTTTGCCTGCCTTCTCTTTAGCCACCTGAAGCGTCGCCCTCATCCCG 67289 Query 117227 GCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCG 117284 | | |||| | ||| ||||||| || ||| || |||||| |||||||||| Sbjct 67290 ACAC-TGTCAAGCGGATTATCACCGAAGCAGTCAAGATTGAGCAGGAGTTCCTCACCG 67346 >seq1986 Length=559288 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| ||||| |||||||| |||| ||||| | | Sbjct 253864 ATGCAAATTTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCGCCT 253805 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| || |||||||| | ||||| Sbjct 253804 GACACCATCGATAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCGCCCGACCA 253746 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | || | || || || ||||| || || | || ||||| |||||||| Sbjct 253745 ACAACGATTGATTTTTGCTGGAAAGCAGCTTGAGGATGGTCGTACCCTATCGGACTACAA 253686 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| |||||||| |||| || || || || Sbjct 253685 CATTCAGAAGGAATCCACTCTTCACCTTGT 253656 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || | || || ||||| || || |||| ||||| | | Sbjct 253361 ATGCAAATCTTCGTGAAGACTTTAACCGGAAAAACGATAACGCTCGAAGTCGAGTCTTCG 253302 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || |||| ||||| || ||||||||| | |||||| Sbjct 253301 GACACCATCGACAATGTAAAGGCCAAGATTCAGGACAAGGAAGGCATCCCCCCTGACCAG 253242 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || || | || || |||||||| || || | || |||||| ||| || ||| Sbjct 253241 CAACGTCTTATTTTTGCTGGAAAACAGCTCGAAGATGGCCGTACCCTCTCCGATTATAAC 253182 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||| ||| | || || || || || Sbjct 253181 ATCCAGAAAGAGTCGACCCTTCACCTTGT 253153 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || |||||||| || || ||||| || | || || || | | Sbjct 253133 ATGCAAATTTTTGTCAAGACGCTCACCGGAAAGACCATTACTCTTGAGGTTGAGTCTTCG 253074 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| || ||||| ||| | || || Sbjct 253073 GACACCATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGCATACCCCCTGATCA 253015 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || | |||| || || || ||| |||| || | ||||| ||| || ||||| Sbjct 253014 ACAGCGTTTGATCTTTGCTGGAAAGCAGTTGGAGGATGGTCGCACTCTCTCGGATTACAA 252955 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCT 40895 ||||||||||||| | || || || || Sbjct 252954 CATCCAGAAGGAGTCGACTCTTCACCT 252928 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| ||||| | ||||||||||| || || | ||| || || ||||| || Sbjct 253543 GACAAGGAGGGTATCCCACCTGACCAGCAACGTCTTATTTTCGCTGGAAAGCAGCTCGAA 253484 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCT 40895 || | || |||||| ||| |||||||||||||||||| | || || || || Sbjct 253483 GATGGTCGTACCCTCTCCGATTACAACATCCAGAAGGAGTCAACTCTTCACCT 253431 >seq2206 Length=69542 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || || ||||| | || || || | || Sbjct 41508 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACTTTGGAGGTGGAGTCTTCC 41449 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || |||| ||||| || ||||| || | |||||| Sbjct 41448 GACACCATCGACAATGTGAAGGCCAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAG 41389 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || |||| ||| ||||| || || || |||| || || || ||||||||| Sbjct 41388 CAACGTCTGATCTTCGCTGGCAAGCAACTCGAGGACGGTCGTACTCTTTCTGACTACAAC 41329 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || || || ||| | || || || || ||| Sbjct 41328 ATTCAAAAAGAGTCTACACTTCACCTCGTG 41299 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854 |||||| | || || ||||||||||||| ||| || || ||||| || |||| |||||| Sbjct 41915 ATCCCCCCTGATCAACAACGACTCATCTTCGCCGGAAAGCAGCTCGAGGACGGACGCACC 41856 Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 || || |||||||| ||||| ||| | || || ||||| || ||||| Sbjct 41855 CTTTCTGATTACAACATTCAGAAAGAGTCGACCCTCCATCTTGTCTTGCG 41806 >seq2370 Length=49093 Score = 82.4 bits (90), Expect = 8e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854 || ||| | |||||||| || || |||| || || |||||||| || || | ||||| Sbjct 22964 ATTCCCCCTGACCAGCAGCGTCTGATCTTTGCTGGAAAACAGCTCGAAGATGGCCGCACT 22905 Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||| ||||||||||| ||||||||| | || || || | |||||||| Sbjct 22904 CTCAGTGACTACAACATTCAGAAGGAGTCTACCCTTCACTTGGTGTTGCG 22855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515202732306320