Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15]
2,557 sequences; 57,384,356 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq2123 116 3e-21
>seq2123
Length=425399
Score = 116 bits (128), Expect = 3e-21
Identities = 283/429 (66%), Gaps = 0/429 (0%)
Strand=Plus/Minus
Query 16237 AGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACC 16296
|||||| || ||| || |||||||| | ||| || || ||||| ||| | || || ||
Sbjct 273858 AGCAAACTCTGTATGTAACCCTTCGTCACGACTGATCAATTCGTTGGAATAGGTCAGTCC 273799
Query 16297 TGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATAT 16356
|||||| || ||||| || || ||||||||||| | ||||| || || || || || ||
Sbjct 273798 TGGCATAAGACCTCGCTTCTTTATCCAAAATATGGAAGCAAAGGAGCCGGAGAAAAAGAT 273739
Query 16357 ACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctat 16416
|| || || || || || || ||||| || ||| | | | | | | |||| |||
Sbjct 273738 TCCCTCCACCGCAGCGAAAGCCACCAAACGTTCAGCAAAAGATGTTTGTTTATCCGATAT 273679
Query 16417 ccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAA 16476
||| | ||||| | || || || | || ||| | ||||| || | |||
Sbjct 273678 CCAGCGGATTGCCCAGTCAGCCTTCCGTCGGATGCAAGGAATGGTTTCTATCGCGTCAAA 273619
Query 16477 TAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTC 16536
| ||| | ||| | ||| || || || ||||| || | | || ||
Sbjct 273618 CAGATATTGCCGTTCGGTTGGGTCTTTGATGTAGGTGTCTATGAGAAGAGAGTATGCCTC 273559
Query 16537 TGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTG 16596
|| || || || ||||| || || ||||||||||| |||| ||||| | | |||
Sbjct 273558 GGAGTGGATGTTTTCCATCATAATTTGGAAACCATAAAAACATCGCGCTTCTGCCACTTG 273499
Query 16597 TACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAA 16656
|| || |||||| |||| ||| ||| ||||| ||||||||||| || || ||
Sbjct 273498 CACCTCGTTTGAAAACCGTTCTACTAGGTTCTCGTTCACTATTCCATCTGACGCAGCGAA 273439
Query 16657 AAACGCAAG 16665
|| |||||
Sbjct 273438 GAAAGCAAG 273430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462497216960200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |