Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq2123 116 3e-21 >seq2123 Length=425399 Score = 116 bits (128), Expect = 3e-21 Identities = 283/429 (66%), Gaps = 0/429 (0%) Strand=Plus/Minus Query 16237 AGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACC 16296 |||||| || ||| || |||||||| | ||| || || ||||| ||| | || || || Sbjct 273858 AGCAAACTCTGTATGTAACCCTTCGTCACGACTGATCAATTCGTTGGAATAGGTCAGTCC 273799 Query 16297 TGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATAT 16356 |||||| || ||||| || || ||||||||||| | ||||| || || || || || || Sbjct 273798 TGGCATAAGACCTCGCTTCTTTATCCAAAATATGGAAGCAAAGGAGCCGGAGAAAAAGAT 273739 Query 16357 ACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctat 16416 || || || || || || || ||||| || ||| | | | | | | |||| ||| Sbjct 273738 TCCCTCCACCGCAGCGAAAGCCACCAAACGTTCAGCAAAAGATGTTTGTTTATCCGATAT 273679 Query 16417 ccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAA 16476 ||| | ||||| | || || || | || ||| | ||||| || | ||| Sbjct 273678 CCAGCGGATTGCCCAGTCAGCCTTCCGTCGGATGCAAGGAATGGTTTCTATCGCGTCAAA 273619 Query 16477 TAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTC 16536 | ||| | ||| | ||| || || || ||||| || | | || || Sbjct 273618 CAGATATTGCCGTTCGGTTGGGTCTTTGATGTAGGTGTCTATGAGAAGAGAGTATGCCTC 273559 Query 16537 TGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTG 16596 || || || || ||||| || || ||||||||||| |||| ||||| | | ||| Sbjct 273558 GGAGTGGATGTTTTCCATCATAATTTGGAAACCATAAAAACATCGCGCTTCTGCCACTTG 273499 Query 16597 TACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAA 16656 || || |||||| |||| ||| ||| ||||| ||||||||||| || || || Sbjct 273498 CACCTCGTTTGAAAACCGTTCTACTAGGTTCTCGTTCACTATTCCATCTGACGCAGCGAA 273439 Query 16657 AAACGCAAG 16665 || ||||| Sbjct 273438 GAAAGCAAG 273430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462497216960200