Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2416 104 5e-17 seq2123 93.3 9e-14 >seq2416 Length=74831 Score = 104 bits (114), Expect = 5e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 157252 CTTGCTGTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCAT 157311 |||| ||| || | |||| ||||| || ||||| |||||||| || | |||||||| Sbjct 67598 CTTGGAGTAATCAGATACTCGCTTCTCGAAGAAGTTTGTCTTTCCTTGCAACGAAATCAT 67539 Query 157312 GTCCATCCACTCGAATGGGTTGGCGCAGTTGTACACCTTGTCGTACCCCAGCTGGTTCAG 157371 |||||| | ||||| ||||||| || |||||| | |||||||| |||| || Sbjct 67538 GTCCATGAAGTCGAAGGGGTTGGTGCTGTTGTAGATCTTGTCGTTACCCAAAGCAACGAG 67479 Query 157372 CCAGTAGTCCGCCACAAACTTGATGTACTCTGTCATGCTCTTCTCGCTGATACCGATGAG 157431 | | ||| || ||||||| |||||||| |||| ||| || | || |||||||| Sbjct 67478 CAGGCGGTCGGCAACAAACTCGATGTACTGACACATGAGCTTAGCGTTCATTCCGATGAG 67419 Query 157432 CGCGACGGGAAGCGC 157446 | |||||| || || Sbjct 67418 TGAGACGGGGAGAGC 67404 >seq2123 Length=425399 Score = 93.3 bits (102), Expect = 9e-14 Identities = 99/128 (77%), Gaps = 2/128 (2%) Strand=Plus/Plus Query 157274 TTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCATCCACTCGAATGGGTTG 157333 |||||||| ||||||||||| ||||| || || ||||| ||||| | ||||| ||||| Sbjct 271324 TTCTCAAAGAAGTTGGTCTTGCCCTGCAGCGAGATCATATCCATGAAGTCGAAGGGGTTC 271383 Query 157334 GCGCAGTTGTACACCTTGTCGTACCCCAGCTGGTTC-AGCCAGTAGTCCGCCACAAACTT 157392 | || |||||| |||||||||| |||| || | ||| | ||| || ||||||| Sbjct 271384 GTGCTGTTGTAGACCTTGTCGTTACCCA-ATGCAACAAGCAGGCGGTCGGCGACAAACTC 271442 Query 157393 GATGTACT 157400 |||||||| Sbjct 271443 GATGTACT 271450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073731221734976