Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2416 96.9 2e-15 seq2123 86.0 4e-12 >seq2416 Length=74831 Score = 96.9 bits (106), Expect = 2e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 || ||||| || || |||||| | | || || || ||||| || ||||| |||||| || Sbjct 67109 GCGTTTGCAGCGGTAGAAGGCATTTTCTTCTCCGGTTCATTCGCCGCCATCTTCTGGATG 67168 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 ||||| || ||| ||||| || ||| | || ||||| ||| | || ||||||||||| Sbjct 67169 AAGAAGCGAGGGCTGATGCCTGGCTTGACCTTCTCCAATGAGCTCATCAGCCGTGACGAG 67228 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCA 22907 || | ||| |||||||| || | || ||||| || Sbjct 67229 GGCATGCACACCGACTTTGCCTGCCTTCTCTTTAGCCA 67266 >seq2123 Length=425399 Score = 86.0 bits (94), Expect = 4e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 ||||| | ||||| || || || || || || | || || ||||| || || || || Sbjct 271797 CGTCTGGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCTCGGGGTCGTTCGCTGCTATT 271738 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 |||||| ||||||| ||| | ||||| || ||| |||| ||||| || | |||||| Sbjct 271737 TTCTGGATGAAGAAGCGTGGTTTGATGCCCGGATTGACGTTCTCCAATGAACTCATTAGC 271678 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTG 22892 |||||||| || | ||| || |||||||| Sbjct 271677 CGTGACGAGGGCATGCACACCGATTTTGCTTG 271646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356222498536471