Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2416 159 5e-34 seq2123 113 6e-20 >seq2416 Length=74831 Score = 159 bits (176), Expect = 5e-34 Identities = 375/560 (67%), Gaps = 12/560 (2%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| ||||| |||||||| | || || || || ||||| || || | Sbjct 67251 CAGGCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCATTGGAGAAGGTCAAG 67192 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || ||||| || || ||||| || | ||| || |||| || ||||| || || ||||| Sbjct 67191 CCAGGCATCAGCCCTCGCTTCTTCATCCAGAAGATGGCGGCGAATGAACCGGAGAAGAAA 67132 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG--CGCT-GTCATGT 50136 || |||||||| || ||||| || ||||| | || || | | | |||| ||| Sbjct 67131 ATGCCTTCTACCGCTGCAAACGCGACAAGGCGTTCACCGAATGTTGAACGCTTGTCCGAG 67072 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 ||||| ||||||| || ||||| || |||||||| || ||||| | |||| Sbjct 67071 ATCCATCGGAGAGCCCAGTCAGCCTTACGCTTGACACAAGGAATGGTTTCAACAGCATCG 67012 Query 50197 AAGAGATAGttt---ttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATAC 50253 ||||| | ||| || || | ||||| | || || ||||| | || || Sbjct 67011 AAGAGGT-GTTCGCGTTGTCG--AGGGTCTTTGATGTAGGTGTCGATGAGGAGGGAGTAT 66955 Query 50254 ATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTA 50313 | || |||||||| ||||| || ||||| || ||||||||||| | || |||| Sbjct 66954 GTCTCGGAATGAATATTTTCCATCATGATCTGGAAACCGTAGAAACAACGCGCTTCGGCG 66895 Query 50314 ATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCT 50373 ||| ||||| | | || ||||| | | ||||| || || || ||||| || Sbjct 66894 GCCTGAACTTCATTTGAGAAACGTTCCACGAGGTTTTCGTTAACAATGCCGTCTGAAGCG 66835 Query 50374 GCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTC 50430 || || || || | ||||| || || || |||||| | | | || ||| Sbjct 66834 GCGAAGAAAGCGAGGACATGAGAGATGAAGTGACGCTCGTTGTCATTCATGCGGTTGTTC 66775 Query 50431 CAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 50490 || || | | ||||| |||| ||| | ||||||| | ||||| |||||||| ||||| Sbjct 66774 CAGTCGTGCAAGTCTTTGGATAGATCCATTTCTTCCGCAGTCCAGAATGATGCTTCTGCT 66715 Query 50491 TTTTTATACATATTCCAGAT 50510 ||||| ||||| | |||||| Sbjct 66714 TTTTTGTACATTTGCCAGAT 66695 >seq2123 Length=425399 Score = 113 bits (124), Expect = 6e-20 Identities = 342/527 (65%), Gaps = 6/527 (1%) Strand=Plus/Minus Query 49981 CCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 50040 || ||||| | ||| || | |||||||||| | || ||||| ||||| || || ||||| Sbjct 273839 CCTTCGTCACGACTGATCAATTCGTTGGAATAGGTCAGTCCTGGCATAAGACCTCGCTTC 273780 Query 50041 TTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAG 50100 || | |||||||||||| ||||| || || || || |||||||| || || || || || Sbjct 273779 TTTATCCAAAATATGGAAGCAAAGGAGCCGGAGAAAAAGATTCCCTCCACCGCAGCGAAA 273720 Query 50101 GCAACAAGTCTCTCTCCATAA---CTGGCGCTGTCATGTATCCACTTTTGAGCCCAATCG 50157 || || | | || || || | | || |||||| ||||| || Sbjct 273719 GCCACCAAACGTTCAGCAAAAGATGTTTGTTTATCCGATATCCAGCGGATTGCCCAGTCA 273660 Query 50158 GCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTA 50217 |||||| | | ||||| || |||||||| || | ||| ||||| | ||| | Sbjct 273659 GCCTTCCGTCGGATGCAAGGAATGGTTTCTATCGCGTCAAACAGATATTGCCGTTCGGTT 273600 Query 50218 CTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATG 50277 ||||| | || || || || | |||| || || || || |||||||| || Sbjct 273599 GGGTCTTTGATGTAGGTGTCTATGAGAAGAGAGTATGCCTCGGAGTGGATGTTTTCCATC 273540 Query 50278 GCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGT 50337 || || || || || ||||||| || || | | ||||| || | |||| ||| Sbjct 273539 ATAATTTGGAAACCATAAAAACATCGCGCTTCTGCCACTTGCACCTCGTTTGAAAACCGT 273480 Query 50338 TCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTT 50397 || ||| || || ||||||||||| || || || || || || | || | | Sbjct 273479 TCTACTAGGTTCTCGTTCACTATTCCATCTGACGCAGCGAAGAAAGCAAGAACCCGGGAT 273420 Query 50398 ATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTCCAATCATTGATATCTTTAGATATA 50454 | |||| | ||| || ||| | | ||||| || | | || ||||||| Sbjct 273419 ACGAAATATCGTTCACTGTCGTTTAAACGGTGGTTCCAGTCCATCAAGTCGTTAGATAAG 273360 Query 50455 TCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 50501 |||| |||||| | ||||| ||||| || ||||| ||| ||||| Sbjct 273359 TCTATTTCTTCGGCAGTCCAGAATGACGCTTCTGCTCGTTTGTACAT 273313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718245842333480