Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq2123 141 9e-29 >seq2123 Length=425399 Score = 141 bits (156), Expect = 9e-29 Identities = 280/410 (68%), Gaps = 6/410 (1%) Strand=Plus/Minus Query 13875 GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCT 13934 ||||| || ||| | || || || | ||| || | |||||| ||| | || | |||| Sbjct 273857 GCAAACTCTGTATGTAACCCTTCGTCACGACTGATCAATTCGTTGGAATAGGTCAGTCCT 273798 Query 13935 GGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATT 13994 ||||| | ||||| || |||| ||||||||| | |||||| || ||||| || || ||| Sbjct 273797 GGCATAAGACCTCGCTTCTTTATCCAAAATATGGAAGCAAAGGAGCCGGAGAAAAAGATT 273738 Query 13995 CCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATC 14054 ||||| || ||||| || || | || ||||| |||| |||| || ||| | ||||||| Sbjct 273737 CCCTCCACCGCAGCGAAAGCCACCAAACGTTCAGCAAAAGATGTTTGTTTATCCGATATC 273678 Query 14055 CATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAAT 14114 || | ||||| |||| || | || || || ||||| || || | ||| Sbjct 273677 CAGCGGATTGCCCAGTCAGCCTTCCGTCGGATGCAAGGAATGGTTTCTATCGCGTCAAAC 273618 Query 14115 AAATATTCC--TTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA-TACATT 14171 | ||||| | ||| || || |||| |||| || || || || ||| | || Sbjct 273617 AGATATTGCCGTTCGGTTGGGTCTTTGA--TGTAGGTGTCTATGAG-AAGAGAGTATGCC 273561 Query 14172 TCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCAT 14231 || ||||| ||||||||||| || || ||||||||||| |||| ||||| | | | Sbjct 273560 TCGGAGTGGATGTTTTCCATCATAATTTGGAAACCATAAAAACATCGCGCTTCTGCCACT 273501 Query 14232 TGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATC 14281 || || || |||| | ||| | | || || || ||||| ||||| Sbjct 273500 TGCACCTCGTTTGAAAACCGTTCTACTAGGTTCTCGTTCACTATTCCATC 273451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479712666693800