Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq1986 95.1 9e-15 >seq1986 Length=559288 Score = 95.1 bits (104), Expect = 9e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 |||||| || | |||||||| || | || || | || ||||| || || || ||||| Sbjct 252942 CTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCAACTGCTTTCCAGCAAA 253001 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037 ||||| ||||||||||| | || | ||||| || || |||| | ||||| | Sbjct 253002 GATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 253061 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 | ||| ||||| || ||| || || | || || || |||||||| || || || || Sbjct 253062 GTCAATGGTGTCCGAAGACTCAACCTCAAGAGTAATGGTCTTTCCGGTGAGCGTCTTGAC 253121 Query 43098 AAAAATTTGCAT 43109 |||||||||||| Sbjct 253122 AAAAATTTGCAT 253133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381357715212306