Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq2123 116 5e-21 >seq2123 Length=425399 Score = 116 bits (128), Expect = 5e-21 Identities = 345/529 (65%), Gaps = 10/529 (2%) Strand=Plus/Minus Query 42086 CCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 42145 || || || | ||| || |||||||||||| | || ||||| ||||| || || ||||| Sbjct 273839 CCTTCGTCACGACTGATCAATTCGTTGGAATAGGTCAGTCCTGGCATAAGACCTCGCTTC 273780 Query 42146 TTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAG 42205 || | ||||||||| || ||||| || || || || |||||||| || || || || || Sbjct 273779 TTTATCCAAAATATGGAAGCAAAGGAGCCGGAGAAAAAGATTCCCTCCACCGCAGCGAAA 273720 Query 42206 GCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGTATCCACTTTTGAGCCCAATCG 42262 || | | | || || || | | || |||||| ||||| || Sbjct 273719 GCCACCAAACGTTCAGCAAAAGATGTTTGTTTATCCGATATCCAGCGGATTGCCCAGTCA 273660 Query 42263 GCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTA 42322 |||||| | | ||||| || |||||||| || | ||| ||||| | ||| | Sbjct 273659 GCCTTCCGTCGGATGCAAGGAATGGTTTCTATCGCGTCAAACAGATATTGCCGTTCGGTT 273600 Query 42323 CTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATG 42382 ||||| | || || || || | |||| || || || || |||||||| || Sbjct 273599 GGGTCTTTGATGTAGGTGTCTATGAGAAGAGAGTATGCCTCGGAGTGGATGTTTTCCATC 273540 Query 42383 GCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGT 42442 || || || || || ||||||| || || | || || || || | |||| ||| Sbjct 273539 ATAATTTGGAAACCATAAAAACATCGCGCTTCTGCCACTTGCACCTCGTTTGAAAACCGT 273480 Query 42443 TCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTT 42502 || ||| || |||||||||||||| || || || || || || | || | | Sbjct 273479 TCTACTAGGTTCTCGTTCACTATTCCATCTGACGCAGCGAAGAAAGCAAGAACCCGGGAT 273420 Query 42503 ATAAAATATTTTTC---GTCCGGTGTTAA--TTTATTCCAATCATTGATATCTTTAGATA 42557 | |||||| ||| ||| || | || | ||||| || | | || ||||||| Sbjct 273419 ACGAAATATCGTTCACTGTC--GTTTAAACGGTGGTTCCAGTCCATCAAGTCGTTAGATA 273362 Query 42558 TATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACAT 42606 |||| |||||| | ||||| ||||| |||||||| ||| ||||| Sbjct 273361 AGTCTATTTCTTCGGCAGTCCAGAATGACGCTTCTGCTCGTTTGTACAT 273313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671117748713320