Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq2206 84.2 2e-11 >seq2206 Length=69542 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || || || || || || || ||||| || ||| ||| | | | | ||||| | || Sbjct 41078 TGGAGAGTAGACTCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTTCGAGCTGC 41137 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TTT 15279 || || ||| | || | ||| ||||||||| ||||||||||| ||||| ||| ||| Sbjct 41138 TTCCCGGCGAAAATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCCTGAATCTTT 41197 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 || ||| || | || ||||| ||| || || || | |||||| || ||||| || Sbjct 41198 GC-CTTCACGTTGTCAATGGTGTCGGACGACTCGACCTCCAGGGTAATCGTCTTACCCGT 41256 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 || || || || || ||||||||| Sbjct 41257 GAGGGTCTTGACGAAGATTTGCATA 41281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362167913251137