Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq1986 87.8 1e-12 >seq1986 Length=559288 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 43930 CTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAA 43989 |||||| || || ||||||||| | ||| |||| || | |||||||| ||||| Sbjct 253170 CTCTTTCTGGATGTTATAATCGGAGAGGGTACGGCCATCTTCGAGCTGTTTTCCAGCAAA 253229 Query 43990 TATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCAT 44049 || | ||||||||||| | || | ||||| || || ||| || || || | Sbjct 253230 AATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGAATCTTGGCCTTTACATT 253289 Query 44050 AGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCAC 44109 | | || || | | ||| || |||| ||| || ||||| ||||||||||||||||| Sbjct 253290 GTCGATGGTGTCCGAAGACTCGACTTCGAGCGTTATCGTTTTTCCGGTTAAAGTCTTCAC 253349 Query 44110 AAATATTTGCATG 44122 || ||||||||| Sbjct 253350 GAAGATTTGCATG 253362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354766543910436