Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2399 118 2e-22 seq1593 109 9e-20 >seq2399 Length=157416 Score = 118 bits (130), Expect = 2e-22 Identities = 100/123 (81%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| || |||||||| ||||| |||||||| || ||||||||||| ||||||||| | || Sbjct 107071 AGGTATTACCAAGCCCGCTATTCGTCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATTTC 107012 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCA 16590 ||| | |||| ||||||| |||| ||||||||||||||||| ||| |||||| | Sbjct 107011 TGGTCTCATCTACGAAGAGACCCGTGGAGTTTTGAAGATCTTCCTTGAGAACGTTATTCG 106952 Query 16591 TGA 16593 ||| Sbjct 106951 TGA 106949 >seq1593 Length=100854 Score = 109 bits (120), Expect = 9e-20 Identities = 114/150 (76%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| |||||||||||||| || |||||||| || ||||||||||| ||||||||| |||| Sbjct 20449 AGGTATCACCAAGCCAGCAATTCGTCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTC 20508 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCA 16590 || | |||| || |||| | | ||| |||||||||||||| | | ||||||| Sbjct 20509 GGGCCTTATCTACGAGGAGACCAGAGGTGTCTTGAAGATCTTCCTGGAAAACGTTATCAG 20568 Query 16591 TGATGCTTTCCACTATACCGAGCACGCTAA 16620 ||| || | ||| || ||||| || || Sbjct 20569 GGATTCTGTGACCTACACTGAGCATGCGAA 20598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79072862117001