Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq2372 98.7 2e-15 >seq2372 Length=127870 Score = 98.7 bits (108), Expect = 2e-15 Identities = 299/460 (65%), Gaps = 4/460 (1%) Strand=Plus/Minus Query 193634 AGTTGAACCTGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGA 193693 |||| | || | || || || ||||| |||||||| ||||| ||||| ||||| || Sbjct 113963 AGTTCAGCCCACAGAAATTTACAATCTCGGTGCTCAGTCCCATGTCAAAGTCTCCTTCGA 113904 Query 193694 GATGCCAGAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGT 193753 |||| | ||||| ||| | |||| |||| | | ||||| ||| | | || || || | Sbjct 113903 GATGGCCGAGTACACTGGTGATGTCGATGGTATTGGAACACTTCGTCTTCTCGATGCTAT 113844 Query 193754 TCGTATGTTGGGAATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTA 193813 || | | || |||||||| | ||||| |||| || || || || || || || Sbjct 113843 CCGAACTTGCGGTTTGGAGAAACACGTTCGATTCTACCAAGCTTCGACTTCTGAGCTCTA 113784 Query 193814 TGGTGGTGTTCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTA 193873 || || | | ||||| | | || | || ||||| | || || ||| || Sbjct 113783 CGGAAAGGTCGTTGAGACTCCTCAGACGGAGAAAACGCCATTCTACCCGCGTAGTCCATA 113724 Query 193874 TGGTGTAGCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATT 193933 || ||||||||||| | | |||||||| || || ||||| ||||||| | Sbjct 113723 CGGCTGCGCAAAGTTGTACGCGTTTTGGATCACTGTCAACTACCGTGAAGCATATGGCAT 113664 Query 193934 CCACGCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGT 193993 | || || ||||| |||||||| |||||| ||| | ||||| ||||| || Sbjct 113663 GTATGCGTGTAACGGTATCCTCTTCAACCACGAAAGTCCCCGGAGAGGAAGAACATTCGT 113604 Query 193994 AACTCGTAAGATTACACAAGG--TTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTT 194051 || | || || | ||||| | | | || || |||||| || | |||| Sbjct 113603 GACGAGGAAAAT--CTCAAGGGCAGTTGCAGAAATATCCGTTGGAAAGCAAGCGTGTCTT 113546 Query 194052 TATCTTGGTAATCTTAATGCTAAGAGGGATTGGGGACACG 194091 || ||||| || ||| |||| | | |||||||| |||| Sbjct 113545 TACCTTGGAAACCTTGATGCCCAACGTGATTGGGGCCACG 113506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807529388516920