Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq2123 109 7e-19 >seq2123 Length=425399 Score = 109 bits (120), Expect = 7e-19 Identities = 342/527 (65%), Gaps = 6/527 (1%) Strand=Plus/Minus Query 33325 CCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 33384 || ||||| | ||| || | |||||||||| | || ||||| ||||| || || ||||| Sbjct 273839 CCTTCGTCACGACTGATCAATTCGTTGGAATAGGTCAGTCCTGGCATAAGACCTCGCTTC 273780 Query 33385 TTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAG 33444 || | ||||||||||||||| || || || || || |||||||| || || ||||| || Sbjct 273779 TTTATCCAAAATATGGAAGCAAAGGAGCCGGAGAAAAAGATTCCCTCCACCGCAGCGAAA 273720 Query 33445 GCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCACTTTTGAGCCCAATCG 33501 || | | | || || || | | || |||||| ||||| || Sbjct 273719 GCCACCAAACGTTCAGCAAAAGATGTTTGTTTATCCGATATCCAGCGGATTGCCCAGTCA 273660 Query 33502 GCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTA 33561 |||||| | | ||||| || |||||||| || | ||| ||||| | ||| | Sbjct 273659 GCCTTCCGTCGGATGCAAGGAATGGTTTCTATCGCGTCAAACAGATATTGCCGTTCGGTT 273600 Query 33562 CTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATG 33621 ||||| | || || || || | |||| || || || || |||||||| || Sbjct 273599 GGGTCTTTGATGTAGGTGTCTATGAGAAGAGAGTATGCCTCGGAGTGGATGTTTTCCATC 273540 Query 33622 GCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGT 33681 || || || || || ||||||| || || | | || || || | |||| ||| Sbjct 273539 ATAATTTGGAAACCATAAAAACATCGCGCTTCTGCCACTTGCACCTCGTTTGAAAACCGT 273480 Query 33682 TCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTT 33741 || | | || || ||||||||||| || || || || || || | || | | Sbjct 273479 TCTACTAGGTTCTCGTTCACTATTCCATCTGACGCAGCGAAGAAAGCAAGAACCCGGGAT 273420 Query 33742 ATAAAATATTTTTC-GTCTGGTGTTA--GTTTATTCCAATCATTGATATCTTTAGATATA 33798 | |||||| ||| | | || | | | | ||||| || | | || ||||||| Sbjct 273419 ACGAAATATCGTTCACTGTCGTTTAAACGGTGGTTCCAGTCCATCAAGTCGTTAGATAAG 273360 Query 33799 TCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 33845 |||| |||||| | ||||| ||||| || ||||| ||| ||||| Sbjct 273359 TCTATTTCTTCGGCAGTCCAGAATGACGCTTCTGCTCGTTTGTACAT 273313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622927289050120