Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1986 104 2e-17 seq2206 102 8e-17 seq2123 82.4 7e-11 >seq1986 Length=559288 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || ||||| |||||| |||| || ||||| | || || Sbjct 253361 ATGCAAATCTTCGTGAAGACTTTAACCGGAAAAACGATAACGCTCGAAGTCGAGTCTTCG 253302 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || || |||||| ||||| ||||| || || || || || Sbjct 253301 GACACCATCGACAATGTAAAGGCCAAGATTCAGGACAAGGAAGGCATCCCCCCTGACCAG 253242 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || |||| | || ||||| |||||||||| | | | || ||| |||||| Sbjct 253241 CAACGTCTTATTTTTGCTGGAAAACAGCTCGAAGATGGCCGTACCCTCTCCGATTATAAC 253182 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || ||||| || || | || || ||||| | ||| | ||||| Sbjct 253181 ATCCAGAAAGAGTCGACCCTTCACCTTGTCCTCCGTCTTCGTGGAGG 253135 >seq2206 Length=69542 Score = 102 bits (112), Expect = 8e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | || || || |||| ||| | || | || || | Sbjct 41280 ATGCAAATCTTCGTCAAGACCCTCACGGGTAAGACGATTACCCTGGAGGTCGAGTCGTCC 41221 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | || || ||||||| ||||| ||||| || |||||||| ||| Sbjct 41220 GACACCATTGACAACGTGAAGGCAAAGATTCAGGACAAGGAAGGAATTCCTCCCGACCAA 41161 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | ||||||| || ||| || || |||||||||| | | | |||||||||| Sbjct 41160 CAGCGTCTCATTTTCGCCGGGAAGCAGCTCGAAGATGGGCGTACTCTTTCCGACTATAAC 41101 Query 26949 ATTCAAAAAGAATCTACTATCCATCT 26974 ||||| || || |||||| |||| || Sbjct 41100 ATTCAGAAGGAGTCTACTCTCCACCT 41075 >seq2123 Length=425399 Score = 82.4 bits (90), Expect = 7e-11 Identities = 131/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 119655 ACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATAAACTCGAAA 119714 ||||| || ||||| || || |||||||||| || || || ||| ||| || ||||| Sbjct 271318 ACACGCTTCTCAAAGAAGTTGGTCTTGCCCTGCAGCGAGATCATATCCATGAAGTCGAAG 271377 Query 119715 GGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAA-CAGTCGATCTGCCAC 119773 || || | ||||| | |||||||| ||||| | ||||| ||| || || || || Sbjct 271378 GGGTTCGTGCTGTTGTAGACCTTGTCGTTACCCAATGC-AACAAGCAGGCGGTCGGCGAC 271436 Query 119774 AAACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAGC-GACCGGTAAAG 119832 |||||||||||| | ||||| || | ||||| || | || ||| ||| || | || Sbjct 271437 AAACTCGATGTACTGACACATAAGTTTGGCGTTCATCCCGATCA-AGCTGACTGGGAGAG 271495 Query 119833 CAT 119835 ||| Sbjct 271496 CAT 271498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478647100753040