Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1573 100 7e-16 seq2416 89.7 1e-12 >seq1573 Length=133326 Score = 100 bits (110), Expect = 7e-16 Identities = 642/1050 (61%), Gaps = 110/1050 (10%) Strand=Plus/Plus Query 363754 GGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813 || ||||| ||||| | || ||||||||||| | | ||| ||| || | |||||| Sbjct 58392 GGCTACTCAAATGGTATAGTGCCCATGCTTCGAGCTTATGATGCTACCGCCCGTTACGTC 58451 Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873 ||||| || || ||||| ||| || ||||| |||||| | ||||| || ||| Sbjct 58452 GACCAAGGAGGCAACAAGCGTCCAGGTGCATTTGCCATGTATATTGAGCCGTGGCACGCC 58511 Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGT 363933 || || || | || |||| || |||| ||| || || |||||| | ||||| ||| Sbjct 58512 GACATCTTCGCCTTCATTGACCTTAGGAAGAACCATGGCAAGGAGGAAGTCCGTGCCCGT 58571 Query 363934 GATCTGTTCTATGCACTTTGGGTTTCTGA---------------CCATTTT--------- 363969 || | ||||| || |||||| | |||| |||| || Sbjct 58572 GACTTATTCTACGCTCTTTGGATCCCTGATCTCTTGTGAGTTTTCCATGTTTCCTTGAGT 58631 Query 363970 ------------------------ATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTC 364005 |||||||| || || || ||| || |||||||| Sbjct 58632 GATGGATGCTCATCGGCCCCTAGCATGAAGCGTGTCGAAGCTGGTGGCAACTGGTCACTG 58691 Query 364006 TTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTA 364065 || || || ||||| || |||||| | ||||| | |||| ||| | | || || Sbjct 58692 TTCTGTCCTAACGAAGCACCTGGTCTTCCTGATGTCTACGGTGCCGAGTTCGAGGCCCTC 58751 Query 364066 TACGAAAAGTATGAATCGGAGGGAAAG----GCTCGTAAGACAATTCCCGCACAGAAGCT 364121 ||||| || || || ||| ||| | |||||| |||| ||||| || ||||| || Sbjct 58752 TACGAGAAATACGA----GAGAGAAGGTCGCGCTCGTGAGACTATTCCTGCCCAGAAACT 58807 Query 364122 ATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACC---------CTATA---- 364168 |||| |||||| | || | ||| | ||||| || ||||| ||||| Sbjct 58808 CTGGTATGCCATTCTCGAGGCACAGGTCGAGACTGGTACACCTTTCATGTGCTATAAGGA 58867 Query 364169 ----------TGT-------------TGTACAAAGATTCGTGC-----AACC-------G 364193 ||| ||| | | ||||| | |||| | Sbjct 58868 CCACGCCAACTGTAAGTATCCATGCCTGTCCTACGATTCAATCTTCTGAACCATCATGAG 58927 Query 364194 C----AAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGA 364249 | |||||||| || || |||||||| || || |||||| || ||||| | Sbjct 58928 CAGCAAAGTCCAATCAAAAGAACCTTGGTGTCATCAAGTCTTCCAACCTTTGCACCGAAA 58987 Query 364250 TTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTC 364309 |||| |||||| | | || || || || |||||||| ||||| || || ||||| | | Sbjct 58988 TTATGGAATACTCTTCCCCTGATGAAACGGCCGTATGCAACCTCGCATCCCTCGCGTTGC 59047 Query 364310 CGGCGTTTGTAAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATG 364369 | | || || | ||| || ||| | || | ||| |||| || ||| | || Sbjct 59048 CTACCTTCGTCCGCAAAGGTCAATTCGACTTCAAGAAGCTTCATGATGTCACCAAGGTTG 59107 Query 364370 CTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGC 364429 | | ||| ||| || | ||||| || || ||||| ||||||| || | Sbjct 59108 TCGCGTTCAACCTCAACCGCATAATCGATGTCAACTACTATCCTGTTCCTGAGGCTCGTC 59167 Query 364430 GTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTA 364489 |||| || |||||||| || || || ||| | ||||| || || ||||| ||| || | Sbjct 59168 GTTCCAACATGCGTCACCGTCCCATCGGTATCGGTGTGCAAGGTCTCGCCGACACCTTCA 59227 Query 364490 TGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTG 364549 || || || | || || || ||||| || |||| || | ||||||| | Sbjct 59228 TGGCCCTTCGTTTGCCTTTCGAGTCACCTGAAGCCAAGCTTCTGAACATCCAGATCTTCG 59287 Query 364550 AAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGT 364609 | || || |||| ||| ||| | | |||| | ||| | || | | | ||| | Sbjct 59288 AGACTATTTATTATGCAGCACTCAATGCTAGTTCAGATATTGCCGAGAAGGATGGACCAT 59347 Query 364610 ACTCTACTTATGAGGGGTCCCCTCTTTC-GCAGGGAAAATTCCAGTTTGATCTATGGAAT 364668 || |||| || |||| || | || ||||| |||| |||| ||| | ||| | Sbjct 59348 ACGAGACTT-GGATGGGTAGCCCCGCTCAACAGGGTCAATTGCAGTACGATATGTGGGGT 59406 Query 364669 GTCACGCCATCTGTCCGATGGAACTGGGAT 364698 |||||||| ||| || ||| |||||||| Sbjct 59407 GTCACGCCGACTGACCTCTGGGACTGGGAT 59436 >seq2416 Length=74831 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 9/210 (4%) Strand=Plus/Plus Query 22440 TAAGGCAGATTGGGCGCTGAAATGGAT---GAACAATGAACGTTCA---TTCGCGGAACG 22493 |||||| || ||||| || |||||| | |||| |||||| |||| ||||| Sbjct 67045 TAAGGCTGACTGGGCTCTCCGATGGATCTCGGACAAG---CGTTCAACATTCGGTGAACG 67101 Query 22494 TCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTT 22553 ||| | || ||||| | ||| |||||||||||||| || || |||| || ||||| Sbjct 67102 CCTTGTCGCGTTTGCAGCGGTAGAAGGCATTTTCTTCTCCGGTTCATTCGCCGCCATCTT 67161 Query 22554 TTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCG 22613 ||| | || || || | | ||||| || | || || || |||||| | || ||||| Sbjct 67162 CTGGATGAAGAAGCGAGGGCTGATGCCTGGCTTGACCTTCTCCAATGAGCTCATCAGCCG 67221 Query 22614 AGATGAGGGTCTTCATACCGATTTTGCGTG 22643 || ||||| | || ||||| ||||| || Sbjct 67222 TGACGAGGGCATGCACACCGACTTTGCCTG 67251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303310900099574