Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2206 98.7 9e-16 seq1986 98.7 9e-16 seq2370 91.5 1e-13 >seq2206 Length=69542 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | || | || ||||| |||||||||||||| || Sbjct 41282 CCACCACGGAGACGAAGCACGAGGTGAAGTGTAGACTCTTTTTGAATGTTGTAGTCAGAA 41341 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| || |||||||| ||| |||| | ||| |||||||| ||||| Sbjct 41342 AGAGTACGACCGTCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGAGGA 41401 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||| | | || | || |||| ||||| | Sbjct 41402 ATGCCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCCACC 41461 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || ||||| || || || || ||||| |||||||| Sbjct 41462 TCCAAAGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 41508 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| || | ||| | ||||||||| || |||||||||||||| Sbjct 41794 CCACCACGGAGACGCAAGACAAGATGGAGGGTCGACTCTTTCTGAATGTTGTAATCAGAA 41853 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| |||||||| || ||| |||| | || || || || || ||| Sbjct 41854 AGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGTCGTTGTTGATCAGGGGGG 41913 Query 131128 ATTC 131131 |||| Sbjct 41914 ATTC 41917 >seq1986 Length=559288 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| || |||||||||||| | ||| || || || |||||||| || Sbjct 253440 GTTGACTCCTTCTGGATGTTGTAATCGGAGAGGGTACGACCATCTTCGAGCTGCTTTCCA 253499 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| | || | ||| |||||||| || ||||| || || ||||| ||| || ||| Sbjct 253500 GCGAAAATAAGACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTGGCCTTT 253559 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | |||||| | ||||||| || | |||| ||| || ||||| | ||| Sbjct 253560 ACGTTGTCGATAGTATCCGACGACTCGACCTCAAGTGTAATGGTCTTTCCGGTCAAAGTC 253619 Query 131218 TTTACGAAAATCTGCAT 131234 || || || |||||||| Sbjct 253620 TTCACAAAGATCTGCAT 253636 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| || ||||||||||| | ||||| ||||| | |||||| || Sbjct 252937 GTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCAACTGCTTTCCA 252996 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 || |||| |||||||| || || || || || ||||| ||||| ||| || |||| Sbjct 252997 GCAAAGATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTTGTCCTGGATCTTGGCCTTG 253056 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || || | ||||| | || | |||| ||| || ||||| || || Sbjct 253057 ACGTTGTCAATGGTGTCCGAAGACTCAACCTCAAGAGTAATGGTCTTTCCGGTGAGCGTC 253116 Query 131218 TTTACGAAAATCTGCATGACT 131238 || || ||||| |||||| || Sbjct 253117 TTGACAAAAATTTGCATGCCT 253137 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || || ||||| ||||||||||| || | ||| || ||||| |||||||| || Sbjct 253668 GTGGATTCCTTCTGAATGTTGTAGTCCGATAGGGTACGACCATCCTCAAGCTGCTTTCCA 253727 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 || | || || || || ||||| || ||||| ||||| ||||| ||| || |||| Sbjct 253728 GCAAAAATCAATCGTTGTTGGTCGGGCGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTG 253787 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || || | ||||||| |||| || | ||| || || || || || Sbjct 253788 ACGTTATCGATGGTGTCAGGCGACTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTC 253847 Query 131218 TTTACGAAAATCTGCATGACT 131238 || |||||||| |||||| || Sbjct 253848 TTGACGAAAATTTGCATGCCT 253868 >seq2370 Length=49093 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | ||||| ||| || || | ||| |||||||| ||||||||||| || || Sbjct 22842 GCCACCGCGGAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCACT 22901 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| || || ||||| || || || |||| | |||||||||||| || || Sbjct 22902 GAGAGTGCGGCCATCTTCGAGCTGTTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGGGG 22961 Query 131127 GATTC 131131 |||| Sbjct 22962 AATTC 22966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471997713290880