Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2416 181 1e-40 >seq2416 Length=74831 Score = 181 bits (200), Expect = 1e-40 Identities = 380/561 (68%), Gaps = 9/561 (2%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| ||||||||||| || | || ||||| || || | ||||||| ||| || || Sbjct 67252 GCAGGCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCATTGGAGAAGGTCAA 67193 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | ||| ||||| ||||| | ||| || || | || || ||| || || || Sbjct 67192 GCCAGGCATCAGCCCTCGCTTCTTCATCCAGAAGATGGCGGCGAATGAACCGGAGAAGAA 67133 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 || ||||| || |||||||| || |||| ||||| | || ||| || Sbjct 67132 AATGCCTTCTACCGCTGCAAACGCGACAAGGCGTTCACCGAATGTTGAACGCTTGTCCGA 67073 Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330 ||||||| | |||||| || || || ||| | |||||| | ||||| | ||| | Sbjct 67072 GATCCATCGGAGAGCCCAGTCAGCCTTACGCTTGACACAAGGAATGGTTTCAACAGCATC 67013 Query 93331 AAATAGGTAATCTCGCTCGTC-CGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389 || |||| || || | ||| | ||| ||||| || ||||| | || || || Sbjct 67012 GAAGAGGTGTTCGCG-TTGTCGAGGGTCTTTGATGTAGGTGTCGATGAGGAGGGAGTATG 66954 Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449 | || ||||| | ||| ||||| || ||||| ||||||||||| | ||||| | | Sbjct 66953 TCTCGGAATGAATATTTTCCATCATGATCTGGAAACCGTAGAAACAACGCGCTTCGGCGG 66894 Query 93450 TCTGCACTTC--TTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 ||| ||||| |||||||| | || ||||| ||||| || || || || || || || Sbjct 66893 CCTGAACTTCATTTGAGAAA--CGTTCCACGAGGTTTTCGTTAACAATGCCGTCTGAAGC 66836 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATC 93564 || || ||||| | | ||| || || || ||| | || || | | || | Sbjct 66835 GGCGAAGAAAGCGAGGACATGAGAGATGAAGTGACGCTCGTTGTCATTCATGCGGTTGTT 66776 Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 ||| ||| | ||||| || ||||| | |||||| ||||||| || ||||||||||| Sbjct 66775 CCAGTCGTGCAAGTCTTTGGATAGATCCATTTCTTCCGCAGTCCAGAATGATGCTTCTGC 66716 Query 93625 TTTTTTGTACATATCCCATAT 93645 |||||||||||| | ||| || Sbjct 66715 TTTTTTGTACATTTGCCAGAT 66695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556843001336680