Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2206 201 2e-46 seq2372 179 7e-40 seq1986 170 4e-37 seq2402 98.7 2e-15 seq2370 98.7 2e-15 seq2286 87.8 3e-12 seq2123 84.2 4e-11 >seq2206 Length=69542 Score = 201 bits (222), Expect = 2e-46 Identities = 172/211 (82%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 68252 TACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTT 68310 ||||||| || || || ||||| || || |||||||| ||||| || || | |||||||| Sbjct 41070 TACCAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTT 41129 Query 68311 CTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTT 68370 | | ||||||||||||||| ||||| | ||||||||||| ||||| ||||||||||| | Sbjct 41130 CGAGCTGCTTCCCGGCGAAAATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCCT 41189 Query 68371 GAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTT 68430 ||||||||||||| ||| || |||||||| | || || || |||| ||| || || | Sbjct 41190 GAATCTTTGCCTTCACGTTGTCAATGGTGTCGGACGACTCGACCTCCAGGGTAATCGTCT 41249 Query 68431 TTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | |||||||||||||||||||| || ||||| Sbjct 41250 TACCCGTGAGGGTCTTGACGAAGATTTGCAT 41280 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || ||||||||||| ||||| || || || Sbjct 41282 CCACCACGGAGACGAAGCACGAGGTGAAGTGTAGACTCTTTTTGAATGTTGTAGTCAGAA 41341 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||| || ||||| || || | ||| ||||| || ||| Sbjct 41342 AGAGTACGACCGTCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGAGGA 41401 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| |||||||| ||||| || ||||||||||| | || || || Sbjct 41402 ATGCCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCCACC 41461 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||| || || |||||||||||||||||||| |||||||| Sbjct 41462 TCCAAAGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 41508 Score = 95.1 bits (104), Expect = 2e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || |||||||||||||| ||||| ||||| ||||||||||| | || || || || Sbjct 41689 CCCTCCTTGTCTTGAATTTTTGCTTTGACATTGTCGATGGTGTCAGAAGACTCAACCTCG 41748 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 | ||||||||| ||||| || | ||| |||||||| ||||||||| Sbjct 41749 AGGGTGATGGTCTTTCCGGTCAAGGTTTTGACGAAGATCTGCATT 41793 >seq2372 Length=127870 Score = 179 bits (198), Expect = 7e-40 Identities = 298/425 (70%), Gaps = 4/425 (1%) Strand=Plus/Plus Query 268369 GATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCC 268428 |||||| | |||||||| || || | | || || ||||||||||||||||| || Sbjct 113591 GATTTTCCTCGTCACGAATGTTCTTCCTCTCCGGGGACTTTCGTGGTTGAAGAGGATACC 113650 Query 268429 GTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACAT 268488 ||| ||||| ||||||||||||| ||||||||||| || |||| | || ||| Sbjct 113651 GTTACACGCATACATGCCATATGCTTCACGGTAGTTGACAGTGATCCAAAACGCGTACAA 113710 Query 268489 CTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTC 268548 |||||| |||| ||| ||| || | ||| ||||| | | | ||||| | || Sbjct 113711 CTTTGCGCAGCCGTATGGACTACGCGGGTAGAATGGCGTTTTCTCCGTCTGAGGAGTCTC 113770 Query 268549 TCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAA-CTTTGTTGTTTTTTCGA 268607 ||| || || ||||||| || ||||| ||||||||||| | || ||| || | Sbjct 113771 AACGACCTTTCCGTAGAGCTCAGAAGTCGAAGCTTGGTAGAATCGAACGTG-TTTCTCCA 113829 Query 268608 GACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTG 268667 |||||| ||||||| || ||||| | |||||| ||||| || ||||| || || | | Sbjct 113830 AACCGCAAGTTCGGATAGCATCGAGAAGACGAAGTGTTCCAATACCATCGACATCACCAG 113889 Query 268668 TATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCT 268727 | ||||| | ||||||||| || || | ||||||| ||| || || || || |||| | Sbjct 113890 TGTACTCGGCCATCTCGAAGGAGACTTTGACATGGGACTGAGCACCGAGATTGTAAATTT 113949 Query 268728 CATCCGGTTTGACCTGCTGC-ACGATCTTCACGAGGTTCGTTGAGTCGGTGAGGTCTCCG 268786 | | || ||| || || | ||| | ||||| || || |||| ||||||| || Sbjct 113950 C-TGTGGGCTGAACTTGAGCAATGATGTATACGAGATTGGTGCTGTCGCTGAGGTCGCCA 114008 Query 268787 TAGTG 268791 || || Sbjct 114009 TAATG 114013 >seq1986 Length=559288 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| ||||| || | || | ||| || || |||||||| |||||||||||||||||| Sbjct 253135 CCTCCACGAAGACGGAGGACAAGGTGAAGGGTCGACTCTTTCTGGATGTTATAATCGGAG 253194 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||| || || || || || || | ||| ||||| || || Sbjct 253195 AGGGTACGGCCATCTTCGAGCTGTTTTCCAGCAAAAATAAGACGTTGCTGGTCAGGGGGG 253254 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| |||||||| ||||| || ||||||||||| | || || ||| Sbjct 253255 ATGCCTTCCTTGTCCTGAATCTTGGCCTTTACATTGTCGATGGTGTCCGAAGACTCGACT 253314 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || || |||||||| || | ||||| ||||| || ||||| Sbjct 253315 TCGAGCGTTATCGTTTTTCCGGTTAAAGTCTTCACGAAGATTTGCAT 253361 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||||| || || || ||||| || || || Sbjct 253638 CCGCCACGGAGACGGAGGACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCCGAT 253697 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || | || |||||||||||| || Sbjct 253698 AGGGTACGACCATCCTCAAGCTGCTTTCCAGCAAAAATCAATCGTTGTTGGTCGGGCGGG 253757 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||| ||||||||| ||||||||||| | || || || Sbjct 253758 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTATCGATGGTGTCAGGCGACTCGACC 253817 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || || ||||||||||||||||| || ||||| Sbjct 253818 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCAT 253864 Score = 150 bits (166), Expect = 3e-31 Identities = 160/210 (76%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 68253 ACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTC 68311 |||||| || || || ||||| || |||||||| ||||| ||||| || | ||||| || Sbjct 252924 ACCAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTC 252983 Query 68312 TAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371 |||||||| || || || || | | ||||| || || || |||||||||||||| || Sbjct 252984 CAACTGCTTTCCAGCAAAGATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTTGTCCTG 253043 Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431 ||||| ||||||||| || |||||||| | || || || || | || ||||| || Sbjct 253044 GATCTTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCAAGAGTAATGGTCTT 253103 Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| ||||| |||||||| || || ||||| Sbjct 253104 TCCGGTGAGCGTCTTGACAAAAATTTGCAT 253133 Score = 149 bits (164), Expect = 1e-30 Identities = 161/212 (76%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 68251 ATACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 |||||||| || || || ||||| || |||||||| ||||||||||| || | |||||| Sbjct 253425 ATACCAAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAATCGGAGAGGGTACGACCATCT 253484 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || | |||||| || ||||| || || | ||| ||||| ||||| || || |||||||| Sbjct 253485 TCGAGCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCC 253544 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || ||||| ||||| ||| ||||| || || | || || || || | || ||||| Sbjct 253545 TGGATCTTGGCCTTTACGTTGTCGATAGTATCCGACGACTCGACCTCAAGTGTAATGGTC 253604 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || | ||||| || || |||||||| Sbjct 253605 TTTCCGGTCAAAGTCTTCACAAAGATCTGCAT 253636 Score = 93.3 bits (102), Expect = 8e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || |||||||| |||||||| || |||||| || ||||| || | || || || || Sbjct 254095 CCCTCCTTGTCCTGAATCTTGGCTTTGACGTTATCAATGGTATCGGAGGACTCGACCTCA 254154 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||||| ||||| || |||||||||||||| |||||||| Sbjct 254155 AGGGTGATGGTCTTTCCAGTAAGGGTCTTGACGAAAATCTGCAT 254198 >seq2402 Length=202812 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || || ||||| || ||||| |||||||| ||||||||||| | ||||| || || Sbjct 187282 CCCTCTTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGACGATTCCACCTCA 187223 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | |||||| || || |||||||||||||||||||| |||||||| Sbjct 187222 AGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 187179 >seq2370 Length=49093 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 ||||||||||| || || || || ||||| ||||||||||||| ||||| || || Sbjct 23018 CCTTCCTTGTCCTGGATTTTGGCTTTGACATTGTCGATGGTGTCTGAGGATTCAACCTCG 23077 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || |||||||| ||||||||||| |||||||| |||||||| Sbjct 23078 AGAGTAATGGTTTTACCCGTGAGGGTTTTGACGAAAATCTGCAT 23121 >seq2286 Length=139373 Score = 87.8 bits (96), Expect = 3e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 68232 TTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCG 68291 ||||| || || |||| | |||| ||| ||||| || | ||| ||||||| || ||| Sbjct 58522 TTTCCACCACGGAGGCTGACAACCAGGTGAAGCGTCGAGTTTTTCTGGATGTCGTACTCG 58581 Query 68292 GAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGG 68349 |||||||| | |||| || ||||| || |||||||| ||||||| ||||| |||| Sbjct 58582 GAGAGTGTACATTCATCCTCCAACTGTTTTCCGGCGAAGATGAGTCGCTGTTGATCGG 58639 >seq2123 Length=425399 Score = 84.2 bits (92), Expect = 4e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 9953 GTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGGGAAATGAGCTCCAT 10012 ||| ||||| || || ||| |||||||||| |||||||| || || || | ||||| Sbjct 271308 GTAGTCCGAGACACGCTTCTCAAAGAAGTTGGTCTTGCCCTGCAGCGAGATCATATCCAT 271367 Query 10013 GAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGTGCTGTGAAAATGCG 10072 |||||| ||||||||| | | | |||| || ||| | ||| | | ||| Sbjct 271368 GAAGTCGAAGGGGTTCGTGCTGTTGTAGACCTTGTCGTTACCCAATGCAACAAGCAGGCG 271427 Query 10073 GTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATGCCAATCATGC 10128 ||| || || |||||||||||||| | ||| || | | |||||| || |||| || Sbjct 271428 GTCGGCGACAAACTCGATGTACTGACACATAAGTTTGGCGTTCATCCCGATCAAGC 271483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921592942644040