Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq2206 125 6e-24 seq1986 89.7 4e-13 >seq2206 Length=69542 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || |||||||| || ||| | |||||| |||||| || || || || Sbjct 41084 GTAGACTCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTTCGAGCTGCTTCCCG 41143 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| | ||||||||||||||||| |||||||| ||||| ||||| ||||||| || Sbjct 41144 GCGAAAATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCCTGAATCTTTGCCTTC 41203 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||||| || ||||| |||| ||| | ||| || || || || || Sbjct 41204 ACGTTGTCAATGGTGTCGGACGACTCGACCTCCAGGGTAATCGTCTTACCCGTGAGGGTC 41263 Query 114366 TTTACAAAAATCTGCAT 114382 || || || || ||||| Sbjct 41264 TTGACGAAGATTTGCAT 41280 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | || | ||||| ||||||||||||||||| || Sbjct 41279 ATACCACCACGGAGACGAAGCACGAGGTGAAGTGTAGACTCTTTTTGAATGTTGTAGTCA 41338 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||||| || || ||||| || |||||| |||| ||||| || ||||| ||| Sbjct 41339 GAAAGAGTACGACCGTCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGA 41398 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| |||||| || | | || | |||||||| || || Sbjct 41399 GGAATGCCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCC 41458 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||| || || || || || || || || |||||||| Sbjct 41459 ACCTCCAAAGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 41508 Score = 86.0 bits (94), Expect = 5e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | | || | || | ||||| || || ||||||||||| ||| Sbjct 41507 ATACCGCCACGGAGACGAAGGACGAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCG 41566 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || |||||| |||||| ||||| || || ||| |||| | ||||||||||| ||| Sbjct 41567 GACAGAGTACGGCCATCTTCCAGTTGCTTCCCCGCGAAGATCAAGCGCTGTTGGTCAGGA 41626 Query 114273 GGAAT 114277 ||||| Sbjct 41627 GGAAT 41631 >seq1986 Length=559288 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | | || | || | || ||||| || ||||||||||| || Sbjct 253635 ATACCGCCACGGAGACGGAGGACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCC 253694 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | |||||| ||| ||||| || || ||||| | || | || |||||||| || Sbjct 253695 GATAGGGTACGACCATCCTCAAGCTGCTTTCCAGCAAAAATCAATCGTTGTTGGTCGGGC 253754 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| ||||| || | | || | |||||| | || ||| Sbjct 253755 GGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTATCGATGGTGTCAGGCGACTCG 253814 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || || | || | || ||||| || || || || || ||||| |||||| || Sbjct 253815 ACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCATGCCT 253868 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||||||| | |||||| |||||| || || || ||| Sbjct 253440 GTTGACTCCTTCTGGATGTTGTAATCGGAGAGGGTACGACCATCTTCGAGCTGCTTTCCA 253499 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| | || ||||| || ||||| || || || || || ||||| ||||| ||| Sbjct 253500 GCGAAAATAAGACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTGGCCTTT 253559 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | || || | || ||||| || | || | || || ||||||| ||| Sbjct 253560 ACGTTGTCGATAGTATCCGACGACTCGACCTCAAGTGTAATGGTCTTTCCGGTCAAAGTC 253619 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 253620 TTCACAAAGATCTGCAT 253636 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || ||||||||||| | ||| ||| ||| || | || || ||| Sbjct 252937 GTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCAACTGCTTTCCA 252996 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| | ||||||||| || || || |||||||| ||||| ||||| || Sbjct 252997 GCAAAGATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTTGTCCTGGATCTTGGCCTTG 253056 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | || || || || | || | || || ||||| || || Sbjct 253057 ACGTTGTCAATGGTGTCCGAAGACTCAACCTCAAGAGTAATGGTCTTTCCGGTGAGCGTC 253116 Query 114366 TTTACAAAAATCTGCATGGCT 114386 || |||||||| |||||| || Sbjct 253117 TTGACAAAAATTTGCATGCCT 253137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420121307167884