Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2123 141 1e-28 seq2416 102 1e-16 >seq2123 Length=425399 Score = 141 bits (156), Expect = 1e-28 Identities = 353/526 (67%), Gaps = 19/526 (4%) Strand=Plus/Plus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | |||||||||||| ||||||||||| ||||| || ||| Sbjct 271649 GCAAAATCGGTGTGCATGCCCTCGTCACGGCTAATGAGTTCATTGGAGAACGTCAATCCG 271708 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| | ||| |||||||||| ||||||||| ||| || || |||||||||||||| Sbjct 271709 GGCATCAAACCACGCTTCTTCATCCAGAAAATAGCAGCGAACGACCCCGAGAAGAAGATA 271768 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAG---GAGCGCGACTTTGTGTCA 126223 ||||| || ||||| |||| ||||||||| ||||| ||||| | | | | Sbjct 271769 CCCTCGACGGCAGCGAAGGCAACCAGACGCTCACCAAAGATCGAGCGTGTATCGGAG--- 271825 Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 126283 | ||| | ||||| | ||||| || || || |||| ||| | | || || Sbjct 271826 ATCCATCGAAGAGCCCAGTCGGCCTTGCGCTTGACGCAGGGGATGGTTTCAACGGCATCG 271885 Query 126284 AAGA---GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATAT 126340 |||| ||||| | || || | |||||| ||||| | || ||||| ||| ||| Sbjct 271886 AAGAGGTGTTCC--CGTTGGCGA-GCATCTTTAATGTAGGTGTCGATGAGGAGTGAGTAT 271942 Query 126341 GTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCT 126399 ||||| ||| | | | ||| || | || || ||||||| | |||||||| Sbjct 271943 GTTTCAGAGTGAATGTTCTCCATCAT-GATTTGGAACCCGTAGAAGCACCGCGCTTCAGC 272001 Query 126400 TATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCC 126459 ||| || |||| | ||| | || |||||| ||||| ||||| || | Sbjct 272002 AGCCTGCACTTCATTAGAGAAACGCTCGACGAGATTCTCGTTGACAATCCCATCAGAAGC 272061 Query 126460 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTT 126516 || || || || |||| | ||||| | | || || ||||||| || | || Sbjct 272062 GGCGAAGAATGCGAGGACGTGTGAGATGAAATGACGCTCGTTTTCGTTCATGCGGTTGTT 272121 Query 126517 CCAGTCGT-CAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||||||| |||| |||||||| ||||| | ||| || || ||||| Sbjct 272122 CCAGTCGTGCAAG-TCCTTCGACAGATCCATCTCTTCGGCGGTCCA 272166 Score = 102 bits (112), Expect = 1e-16 Identities = 209/308 (68%), Gaps = 2/308 (1%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||||||| || | || |||||||| ||| | ||| || || || ||||||| Sbjct 273857 GCAAACTCTGTATGTAACCCTTCGTCACGACTGATCAATTCGTTGGAATAGGTCAGTCCT 273798 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| ||||| |||||||| | ||| || || | | ||| || || ||||| |||||| Sbjct 273797 GGCATAAGACCTCGCTTCTTTATCCAAAATATGGAAGCAAAGGAGCCGGAGAAAAAGATT 273738 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA-AA 126225 |||||||| ||||| || | | ||| |||||||| || | ||| | | | Sbjct 273737 CCCTCCACCGCAGCGAAAGCCACCAAACGTTCAGCAAAAGA-TGTTTGTTTATCCGATAT 273679 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 126285 ||| || ||||| | ||||| ||| || || | ||| | ||||| ||||| Sbjct 273678 CCAGCGGATTGCCCAGTCAGCCTTCCGTCGGATGCAAGGAATGGTTTCTATCGCGTCAAA 273619 Query 126286 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 126345 || | | | ||| | ||| ||||||||||| | |||||||| || |||| || Sbjct 273618 CAGATATTGCCGTTCGGTTGGGTCTTTGATGTAGGTGTCTATGAGAAGAGAGTATGCCTC 273559 Query 126346 GCCGTGGA 126353 | ||||| Sbjct 273558 GGAGTGGA 273551 >seq2416 Length=74831 Score = 102 bits (112), Expect = 1e-16 Identities = 347/528 (66%), Gaps = 21/528 (4%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| | |||||||||||| |||||| ||||| |||||| || || Sbjct 67249 GGCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCATTGGAGAAGGTCAAGCC 67190 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||| || || |||||||||| |||||| || || |||||||| |||||||| || Sbjct 67189 AGGCATCAGCCCTCGCTTCTTCATCCAGAAGATGGCGGCGAATGAACCGGAGAAGAAAAT 67130 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA---GGAGCGCGACTTTGTGTC 126222 || || || || ||||| | || || ||| | || || ||| |||| Sbjct 67129 GCCTTCTACCGCTGCAAACGCGACAAGGCGTTCACCGAATGTTGAACGC----TTGTCCG 67074 Query 126223 A-AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTT 126281 | | ||| | ||||| | ||||| || || ||| || | ||| | | || | Sbjct 67073 AGATCCATCGGAGAGCCCAGTCAGCCTTACGCTTGACACAAGGAATGGTTTCAACAGCAT 67014 Query 126282 CAAAGAGTTCCTTC---TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAAT 126338 | ||||| | ||| || || || || ||||||||||| | || ||||| || | Sbjct 67013 CGAAGAGGT-GTTCGCGTTGTC-GA-GGGTCTTTGATGTAGGTGTCGATGAGGAGGGAGT 66957 Query 126339 ATGTTTCGCCGTGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCG 126397 |||| ||| || | ||| ||| || | ||| | |||||||| | ||||||||| Sbjct 66956 ATGTCTCGGAATGAATATTTTCCATCAT-GATCTGGAAACCGTAGAAACAACGCGCTTCG 66898 Query 126398 CTTATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGAC 126457 ||| || |||| | ||| | || || || |||||| || || || Sbjct 66897 GCGGCCTGAACTTCATTTGAGAAACGTTCCACGAGGTTTTCGTTAACAATGCCGTCTGAA 66838 Query 126458 CCAGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTC 126514 | || || || || |||| || ||||| | | || || || |||| || | Sbjct 66837 GCGGCGAAGAAAGCGAGGACATGAGAGATGAAGTGACGCTCGTTGTCATTCATGCGGTTG 66778 Query 126515 TTCCAGTCGT-CAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||||||||| |||| || || || ||||| | || ||||||||||| Sbjct 66777 TTCCAGTCGTGCAAG-TCTTTGGATAGATCCATTTCTTCCGCAGTCCA 66731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597334507085560