Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1986 104 2e-17 seq2206 96.9 3e-15 >seq1986 Length=559288 Score = 104 bits (114), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | || || || |||| || ||||| || ||||||||||| || | Sbjct 253637 ACCGCCACGGAGACGGAGGACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCCGA 253696 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | || ||||||||||| || ||| |||| | || || |||||||| || Sbjct 253697 TAGGGTACGACCATCCTCAAGCTGCTTTCCAGCAAAAATCAATCGTTGTTGGTCGGGCGG 253756 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCC 64393 || ||||| || || || || || ||| || || | || ||| |||| || Sbjct 253757 GATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTATCGATGGTGTCA--GGCGACTCG 253814 Query 64394 ACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || | ||| | ||||||||| || | || || |||||||||||||| Sbjct 253815 ACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCAT 253864 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 || |||| || || || || || ||||||||||| | || ||| || | ||||| ||| Sbjct 253431 AGGTGAAGAGTTGACTCCTTCTGGATGTTGTAATCGGAGAGGGTACGACCATCTTCGAGC 253490 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 ||||| || || |||| || || |||||||| || || || || || || || || || Sbjct 253491 TGCTTTCCAGCGAAAATAAGACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATC 253550 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCTTGC 64415 || |||||| || | |||| ||| || || || || | || | |||||| | Sbjct 253551 TTGGCCTTTACGTTGTCGATAGTAT--CCGACGACTCGACCTCAAGTGTAATGGTCTTTC 253608 Query 64416 CGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||| || || || || ||||| Sbjct 253609 CGGTCAAAGTCTTCACAAAGATCTGCAT 253636 >seq2206 Length=69542 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| || |||| || || ||||||||||||||||| || | | || || |||| Sbjct 41296 AAGCACGAGGTGAAGTGTAGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTACGACCGTC 41355 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || || |||||||| || | || || || |||||||| |||||||| ||||| || || Sbjct 41356 CTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTC 41415 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| ||| || | || || | ||||| || | ||| | || Sbjct 41416 CTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCCACCTCCAAAGTGATCGT 41475 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || || | || || ||||| || ||||| Sbjct 41476 CTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 41508 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || |||||||| || || | | || ||| | ||||| |||||||| ||| Sbjct 41084 GTAGACTCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTTCGAGCTGCTTCCCG 41143 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || ||||||| ||||| |||||||||||||||||||| || || || || ||| ||| Sbjct 41144 GCGAAAATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCCTGAATCTTTGCCTTC 41203 Query 64367 AC 64368 || Sbjct 41204 AC 41205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499628830103080