Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2206 118 1e-21 seq2370 82.4 8e-11 seq2123 82.4 8e-11 seq1986 82.4 8e-11 >seq2206 Length=69542 Score = 118 bits (130), Expect = 1e-21 Identities = 146/196 (74%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| |||||||| |||||| | ||||||| || ||||| || || |||| Sbjct 41087 GACTCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTTCGAGCTGCTTCCCGGCG 41146 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 | || |||||||||||||| ||||| || ||||| ||||| ||| | |||| || | Sbjct 41147 AAAATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTC-CTGAATCTTTGCCTTCAC 41205 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | |||||||| |||||| ||||| | || | ||| ||||| || || || | Sbjct 41206 GTTG-TCAATGGTGTCGGACGACTCGACCTCCAGGGTAATCGTCTTACCCGTGAGGGTCT 41264 Query 138599 TTACAAAAATCTGCAT 138614 | || || || ||||| Sbjct 41265 TGACGAAGATTTGCAT 41280 Score = 118 bits (130), Expect = 1e-21 Identities = 146/196 (74%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| ||||||||||||||||| | |||||| |||||||||||| || || | Sbjct 41315 GACTCTTTTTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCGAGTTGCTTGCCAGCG 41374 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538 |||| ||||| || ||||| ||||| || ||||| ||||| ||| | || | || Sbjct 41375 AAGATCAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTC-CTGAATCTTGGCCTTCAC 41433 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | |||||||| ||||||||||| | || | ||| ||||| || || || | Sbjct 41434 ATTG-TCGATGGTGTCGGAAGACTCCACCTCCAAAGTGATCGTCTTACCCGTGAGGGTCT 41492 Query 138599 TTACAAAAATCTGCAT 138614 | || || |||||||| Sbjct 41493 TGACGAAGATCTGCAT 41508 >seq2370 Length=49093 Score = 82.4 bits (90), Expect = 8e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | |||||| || || || | | | |||||||| |||||||||||||| || Sbjct 22842 GCCACCGCGGAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCACT 22901 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| || || ||||| ||||| || | | |||| |||||||| ||||| || || Sbjct 22902 GAGAGTGCGGCCATCTTCGAGCTGTTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGGGG 22961 Query 138507 TAT 138509 || Sbjct 22962 AAT 22964 >seq2123 Length=425399 Score = 82.4 bits (90), Expect = 8e-11 Identities = 134/184 (73%), Gaps = 8/184 (4%) Strand=Plus/Minus Query 52650 GCGCTGCCGGTCGAGCT-GCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTT 52708 || || || ||| |||| | | || |||||||| | ||||| ||||||||||||| Sbjct 271496 GCTCTCCCAGTC-AGCTTGATCGGGATGAACGCCAAACTTATGTGTCAGTACATCGAGTT 271438 Query 52709 TGTGGCGGATCGTCTG-TTGGTGCAGCTCGGGCAGCCA-AAGTACTTCAAC-GCTCGCAA 52765 ||| || || || ||| ||| |||| | ||| | | | ||| || |||| || || || Sbjct 271437 TGTCGCCGACCGCCTGCTTGTTGCA--TTGGGTAACGACAAGGTCTACAACAGCACG-AA 271381 Query 52766 TCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCG 52825 || || || || ||| | | || ||||| |||||||||||||||| || |||||||| Sbjct 271380 CCCCTTCGACTTCATGGATATGATCTCGCTGCAGGGCAAGACCAACTTCTTTGAGAAGCG 271321 Query 52826 AGTC 52829 ||| Sbjct 271320 TGTC 271317 >seq1986 Length=559288 Score = 82.4 bits (90), Expect = 8e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| |||||||||||||| | ||||| ||||| || || || || | | Sbjct 253671 GATTCCTTCTGAATGTTGTAGTCCGATAGGGTACGACCATCCTCAAGCTGCTTTCCAGCA 253730 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || | || |||||||| || || || ||||| ||||| ||| || || | Sbjct 253731 AAAATCAATCGTTGTTGGTCGGGCGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACG 253790 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | |||||| ||||||| || | || || ||||| || || || Sbjct 253791 TTATCGATGGTGTCAGGCGACTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTG 253850 Query 138601 ACAAAAATCTGCATGGCT 138618 || ||||| |||||| || Sbjct 253851 ACGAAAATTTGCATGCCT 253868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496246538213040