Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq2206 98.7 7e-16 seq1986 82.4 5e-11 >seq2206 Length=69542 Score = 98.7 bits (108), Expect = 7e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| ||||| |||||||| |||||||| || ||| | | |||| || | ||| Sbjct 41306 TGAAGTGTAGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCGAGTTGC 41365 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||||||| | |||| ||| || ||||| ||||| ||||||||||| ||| ||| Sbjct 41366 TTGCCAGCGAAGATCAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTG 41425 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || || ||| | || || || || || || || ||||| || Sbjct 41426 GCCTTCACATTGTCGATGGTGTCGGAAGACTCCACCTCCAAAGTGATCGTCTTACCCGTG 41485 Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177 || || || || || || |||||| Sbjct 41486 AGGGTCTTGACGAAGATCTGCATA 41509 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || || ||||| || || || ||||| || ||| ||| | | | | ||||| | || Sbjct 41078 TGGAGAGTAGACTCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTTCGAGCTGC 41137 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTT 15092 || || ||| | || | ||||||||||||| ||||||||||||||||| ||| ||| Sbjct 41138 TTCCCGGCGAAAATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCCTGAATCTTT 41197 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 || || || | || || || ||| || || || | |||||| || ||||| || Sbjct 41198 GC-CTTCACGTTGTCAATGGTGTCGGACGACTCGACCTCCAGGGTAATCGTCTTACCCGT 41256 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 || || || || || ||||||||| Sbjct 41257 GAGGGTCTTGACGAAGATTTGCATA 41281 >seq1986 Length=559288 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| || || || || || ||||||||||| |||| | | | || || || || Sbjct 252931 TGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCAACTGC 252990 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || ||||| | |||||||||||||| || || || ||||||||||| || ||| Sbjct 252991 TTTCCAGCAAAGATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTTGTCCTGGATCTTG 253050 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || || | || || || || | || || || | |||||||| || || || Sbjct 253051 GCCTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCAAGAGTAATGGTCTTTCCGGTG 253110 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || || || |||||||||||||| Sbjct 253111 AGCGTCTTGACAAAAATTTGCAT 253133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357380862436745