Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1986 118 1e-21 seq2206 82.4 7e-11 >seq1986 Length=559288 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || || | | || || || || || || || || ||||| ||||||||| Sbjct 253132 ATGCCTCCACGAAGACGGAGGACAAGGTGAAGGGTCGACTCTTTCTGGATGTTATAATCG 253191 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| ||| || | |||||||| || | || | ||||||||||| || Sbjct 253192 GAGAGGGTACGGCCATCTTCGAGCTGTTTTCCAGCAAAAATAAGACGTTGCTGGTCAGGG 253251 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || |||||||| || || ||||| || || | || | |||||| ||||||||| Sbjct 253252 GGGATGCCTTCCTTGTCCTGAATCTTGGCCTTTACATTGTCGATGGTGTCCGAAGACTCG 253311 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || | |||||| ||||||| ||| || || || |||||||| Sbjct 253312 ACTTCGAGCGTTATCGTTTTTCCGGTTAAAGTCTTCACGAAGATTTGCAT 253361 Score = 105 bits (116), Expect = 6e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 45135 AGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAAT 45194 || || || || || ||||| ||||| || ||||| || || | ||| ||||| Sbjct 252928 AGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCAAC 252987 Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 || ||||| || | ||||| || || || || || || |||||||| || || || || Sbjct 252988 TGCTTTCCAGCAAAGATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTTGTCCTGGATC 253047 Query 45255 TTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCC 45313 || |||| || | || | |||||| |||||||| || || ||||||| || || || Sbjct 253048 TTGGCCTTGA-CGTTGTCAATGGTGTCCGAAGACTCAACCTCAAGAGTAATGGTCTTTCC 253106 Query 45314 GGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || || || |||||||||||||| Sbjct 253107 GGTGAGCGTCTTGACAAAAATTTGCAT 253133 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || || || || || |||||||| || || || || || Sbjct 253635 ATACCGCCACGGAGACGGAGGACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCC 253694 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| || | || ||||| || | ||||||||||| ||||| ||| Sbjct 253695 GATAGGGTACGACCATCCTCAAGCTGCTTTCCAGCAAAAATCAATCGTTGTTGGTCGGGC 253754 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || |||||||| || || || || || |||| || | || | |||||| | ||||| Sbjct 253755 GGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTATCGATGGTGTCAGGCGACTC 253813 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| |||||||| | || ||||| || || || || || ||||||||||| Sbjct 253814 GACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCAT 253864 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/215 (69%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 45135 AGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAAT 45194 || || || ||||| ||||| ||||| || |||||| || ||| | ||| || | Sbjct 253431 AGGTGAAGAGTTGACTCCTTCTGGATGTTGTAATCGGAGAGGGTACGACCATCTTCGAGC 253490 Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 || ||||| ||| | || | ||||||||||| || || || || || || || || || Sbjct 253491 TGCTTTCCAGCGAAAATAAGACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATC 253550 Query 45255 TTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCC 45313 || || | || | || | || || || |||||||| || || |||| || || || Sbjct 253551 TTGGCCTTTA-CGTTGTCGATAGTATCCGACGACTCGACCTCAAGTGTAATGGTCTTTCC 253609 Query 45314 GGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348 ||| | ||| || ||||| || ||||| ||| || Sbjct 253610 GGTCAAAGTCTTCACAAAGATCTGCATACCGCCAC 253644 >seq2206 Length=69542 Score = 82.4 bits (90), Expect = 7e-11 Identities = 116/163 (71%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || | ||| || || ||| | |||| ||||||||||| || ||||||||||| || Sbjct 41354 TCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTG 41413 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 || ||||| || || | || | ||||||||||||||| || || | ||| | | Sbjct 41414 TCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCCACCTCCAAAGTGATC 41473 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348 || || || || || || || || || || ||||| ||| || Sbjct 41474 GTCTTACCCGTGAGGGTCTTGACGAAGATCTGCATACCGCCAC 41516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451988752847720