Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2123 127 3e-24 seq2416 87.8 2e-12 >seq2123 Length=425399 Score = 127 bits (140), Expect = 3e-24 Identities = 373/565 (66%), Gaps = 25/565 (4%) Strand=Plus/Plus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || ||| | |||||||||||| ||||||||||| ||||| || || Sbjct 271648 AGCAAAATCGGTGTGCATGCCCTCGTCACGGCTAATGAGTTCATTGGAGAACGTCAATCC 271707 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||| | ||| |||||||||| ||||||||| ||| || || || ||||||||||| Sbjct 271708 GGGCATCAAACCACGCTTCTTCATCCAGAAAATAGCAGCGAACGACCCCGAGAAGAAGAT 271767 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAG---GAGCGGGACTTTGTATC 127695 ||||| || ||||| |||| |||||||| ||||| ||||| |||||| Sbjct 271768 ACCCTCGACGGCAGCGAAGGCAACCAGACGCTCACCAAAGATCGAGCG------TGTATC 271821 Query 127696 ---AAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC 127752 | ||| | ||||| | ||||| || || || |||| ||| | | || Sbjct 271822 GGAGATCCATCGAAGAGCCCAGTCGGCCTTGCGCTTGACGCAGGGGATGGTTTCAACGGC 271881 Query 127753 TTCAAAGA---GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGA 127809 || |||| ||||| | || || | |||||| ||||| | || ||||| ||| Sbjct 271882 ATCGAAGAGGTGTTCC--CGTTGGCGA-GCATCTTTAATGTAGGTGTCGATGAGGAGTGA 271938 Query 127810 ATATGTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTT 127868 |||||||| ||| | | | ||| || | || || ||||||| | ||||||| Sbjct 271939 GTATGTTTCAGAGTGAATGTTCTCCATCAT-GATTTGGAACCCGTAGAAGCACCGCGCTT 271997 Query 127869 CGCTTATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGG 127928 | ||| || |||| | ||| | || |||||| ||||| ||||| | Sbjct 271998 CAGCAGCCTGCACTTCATTAGAGAAACGCTCGACGAGATTCTCGTTGACAATCCCATCAG 272057 Query 127929 ACCCAGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGG 127985 | | || || || || |||| | ||||| | | || || ||||||| || Sbjct 272058 AAGCGGCGAAGAATGCGAGGACGTGTGAGATGAAATGACGCTCGTTTTCGTTCATGCGGT 272117 Query 127986 TCTTCCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA-ATTGCTCATT 128044 | |||||||||| | ||||| || ||||| | ||| || || ||||| | || || Sbjct 272118 TGTTCCAGTCGTGCAAGTCCTTCGACAGATCCATCTCTTCGGCGGTCCAGAATGAGGCTT 272177 Query 128045 TGAGCCTTCTTATAGAGTTCCCAGA 128069 | |||||||| || | || ||||| Sbjct 272178 CG-GCCTTCTTGTACATTTGCCAGA 272201 >seq2416 Length=74831 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | |||||||||||| |||||| ||||| |||||| || || Sbjct 67248 GCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCATTGGAGAAGGTCAAGCCA 67189 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| || || |||||||||| |||||| || || ||||| || |||||||| || Sbjct 67188 GGCATCAGCCCTCGCTTCTTCATCCAGAAGATGGCGGCGAATGAACCGGAGAAGAAAATG 67129 Query 127640 CCCTCCAC 127647 || || || Sbjct 67128 CCTTCTAC 67121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613487590776120