Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1573 100 5e-16 >seq1573 Length=133326 Score = 100 bits (110), Expect = 5e-16 Identities = 163/229 (71%), Gaps = 7/229 (3%) Strand=Plus/Minus Query 203838 TCTTGTCCACCGTGAACTGAATGGCGTTCACGGC---AGGCCTGCTTCTCAGATAGTACA 203894 ||| ||| || |||||||||||||| | |||| ||||| | || || ||||||| Sbjct 60013 TCTGGTCGACGGTGAACTGAATGGCCTGAGCGGCGGGNGGCCTCGTCCTGAGGTAGTACA 59954 Query 203895 TGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA-CG 203953 | |||||||| | ||||||| ||| || || | ||||||| || || | | || || Sbjct 59953 TCCCGGTCTTCAAACCCTTCTTCCATCCATAGAAGTGCATGCTAGTCAACTGACCCATCG 59894 Query 203954 TTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATC 204012 |||| | | |||| ||||| ||| ||| ||| || ||| ||| |||||| || || || Sbjct 59893 TTGGTG-CCGCCAGGTGAACGTTGAGACTCTGACTCTGGCAGAT-AAAGGCACCGCGGTC 59836 Query 204013 TGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 || || | | | | ||||||| || |||||||| || |||||| Sbjct 59835 AGCAGCGAGGTCCAGGACCTTCTTCTGGGAGATCTCCCAGACAGTCTTG 59787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795129784851920