Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq2206 167 6e-36 seq1986 118 2e-21 seq2402 93.3 1e-13 seq2370 84.2 5e-11 >seq2206 Length=69542 Score = 167 bits (184), Expect = 6e-36 Identities = 160/205 (78%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 ||||||||||||| |||||||| || | ||| ||||| | | ||| | |||||||| | Sbjct 41073 CAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTTCGA 41132 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||| |||||||| ||||||||||| ||||| ||| ||||||||| ||||||| Sbjct 41133 GCTGCTTCCCGGCGAAAATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCCTGAA 41192 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 ||||| ||||||| || | |||||| | | || || |||| || |||||||||| Sbjct 41193 TCTTTGCCTTCACGTTGTCAATGGTGTCGGACGACTCGACCTCCAGGGTAATCGTCTTAC 41252 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||| || || || || ||||| Sbjct 41253 CCGTGAGGGTCTTGACGAAGATTTG 41277 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || || ||||| ||||| | ||||||||||| | ||| | || || Sbjct 41297 AGCACGAGGTGAAGTGTAGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTACGACCGTCC 41356 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| || |||||||| ||||| |||||||| ||| ||| ||||| ||| Sbjct 41357 TCGAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 41416 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| |||||| |||| |||||| | | || || ||||| ||||||||| Sbjct 41417 TGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCCACCTCCAAAGTGATCGTC 41476 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| || || || || || || Sbjct 41477 TTACCCGTGAGGGTCTTGACGAAGATCTG 41505 Score = 89.7 bits (98), Expect = 1e-12 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || || |||||||| || | ||||||||| | || ||| | |||||| Sbjct 41525 AGGACGAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCT 41584 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 ||||| ||||| || |||||||| | ||||| ||||| ||| Sbjct 41585 TCCAGTTGCTTCCCCGCGAAGATCAAGCGCTGTTGGTCAGGA 41626 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | || |||||| ||||| |||||||| || || | |||||| |||| | || Sbjct 41800 CGGAGACGCAAGACAAGATGGAGGGTCGACTCTTTCTGAATGTTGTAATCAGAAAGGGTG 41859 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | ||| || || ||||||||||||||||||||||| || || || || || Sbjct 41860 CGTCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGTCGTTGTTGATCAGG 41909 >seq1986 Length=559288 Score = 118 bits (130), Expect = 2e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 ||||||| |||||||||||||| |||| |||||| || | | ||| | ||||| |||| Sbjct 252926 CAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCA 252985 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||||| || ||||| | |||||| || || || || ||||| ||||| | Sbjct 252986 ACTGCTTTCCAGCAAAGATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTTGTCCTGGA 253045 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 |||| ||| ||| || | |||||| | | || || || | || || ||||| | Sbjct 253046 TCTTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCAAGAGTAATGGTCTTTC 253105 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 | ||||| || || ||||||||||| Sbjct 253106 CGGTGAGCGTCTTGACAAAAATTTG 253130 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||||||||| || |||||||| || |||| ||| || || | | || Sbjct 253141 CGAAGACGGAGGACAAGGTGAAGGGTCGACTCTTTCTGGATGTTATAATCGGAGAGGGTA 253200 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| ||||| ||||| || || || ||||| |||||||| || || ||| Sbjct 253201 CGGCCATCTTCGAGCTGTTTTCCAGCAAAAATAAGACGTTGCTGGTCAGGGGGGATGCCT 253260 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| || |||| |||||| | | || || || | | Sbjct 253261 TCCTTGTCCTGAATCTTGGCCTTTACATTGTCGATGGTGTCCGAAGACTCGACTTCGAGC 253320 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || | ||| ||||| || ||||| Sbjct 253321 GTTATCGTTTTTCCGGTTAAAGTCTTCACGAAGATTTG 253358 Score = 107 bits (118), Expect = 5e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| ||||| || ||||| || | ||||||||| | | || | ||||| Sbjct 253653 AGGACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCCGATAGGGTACGACCATCC 253712 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| || || || | || || ||||| || || ||||| ||| Sbjct 253713 TCAAGCTGCTTTCCAGCAAAAATCAATCGTTGTTGGTCGGGCGGGATGCCTTCCTTGTCC 253772 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 253773 TGGATCTTGGCCTTGACGTTATCGATGGTGTCAGGCGACTCGACCTCGAGAGTGATGGTC 253832 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || |||||||| Sbjct 253833 TTGCCAGTGAGGGTCTTGACGAAAATTTG 253861 Score = 104 bits (114), Expect = 6e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 ||||||| ||||| |||||||| |||| |||||| || | | || | |||||||| | Sbjct 253429 CAAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAATCGGAGAGGGTACGACCATCTTCGA 253488 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 |||||||||| ||||| || ||||| |||||||| || || || || ||||| | Sbjct 253489 GCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGA 253548 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 |||| ||| ||| |||| || || | | || || || | || || ||||| | Sbjct 253549 TCTTGGCCTTTACGTTGTCGATAGTATCCGACGACTCGACCTCAAGTGTAATGGTCTTTC 253608 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 | || | ||| |||||||| || || Sbjct 253609 CGGTCAAAGTCTTCACAAAGATCTG 253633 Score = 86.0 bits (94), Expect = 1e-11 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 ||||| ||||| ||||||||| | |||||||| | || | ||||||||||| ||||| Sbjct 253510 CTTATTTTCGCTGGAAAGCAGCTCGAAGATGGTCGTACCCTCTCCGATTACAACATCCAG 253451 Query 200995 AAAGAGTCTACTCTTCACCTTG 201016 || ||||| ||||||||||||| Sbjct 253450 AAGGAGTCAACTCTTCACCTTG 253429 Score = 84.2 bits (92), Expect = 5e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 ||||| || |||||||||||||| ||||| | ||| | | ||||||||| ||||||| Sbjct 253004 ATCTTTGCTGGAAAGCAGTTGGAGGATGGTCGCACTCTCTCGGATTACAACATCCAGAAG 252945 Query 200998 GAGTCTACTCTTCACCTTG 201016 ||||| ||||||||||||| Sbjct 252944 GAGTCGACTCTTCACCTTG 252926 >seq2402 Length=202812 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| |||||||||||||| |||| |||||||||| ||||| | ||||| Sbjct 187448 AGGACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCACTTAAAGTACGACCATCC 187389 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || ||||||||||| || || |||||||| || || || || Sbjct 187388 TCGAGCTGCTTTCCAGCAAATATGAGACGTTGTTGATCGGG 187348 >seq2370 Length=49093 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| || || |||||||| || | |||||||||| | ||| | |||||||| ||||| Sbjct 22866 GTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCACTGAGAGTGCGGCCATCTTCGAGCTG 22925 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTC 199526 ||||| || ||||| |||||||||||||| || ||||| Sbjct 22926 TTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGAATTC 22966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178882976686319