Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2123 338 6e-88 seq2416 237 2e-57 seq2206 123 2e-23 seq1986 107 2e-18 seq2370 82.4 8e-11 >seq2123 Length=425399 Score = 338 bits (374), Expect = 6e-88 Identities = 419/570 (74%), Gaps = 9/570 (2%) Strand=Plus/Plus Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935 |||||| |||| | | ||||||||| ||| |||| ||||||||| | | |||||| Sbjct 271627 CAAATGACTGAAGAGAAGGCAAGCAAAATCGGTGTGCATGCCCTCGTCACGGCTAATGAG 271686 Query 132936 TTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGC 132995 ||| ||| ||| ||||| |||||||| | || || || || | ||| || || || || Sbjct 271687 TTCATTGGAGAACGTCAATCCGGGCATCAAACCACGCTTCTTCATCCAGAAAATAGCAGC 271746 Query 132996 GAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAA 133055 ||| ||||| ||||||| ||||||||||| ||||| || ||||| ||||| || || Sbjct 271747 GAACGACCCCGAGAAGAAGATACCCTCGACGGCAGCGAAGGCAACCAGACGCTCACCAAA 271806 Query 133056 CGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGG 133115 | | | | || |||||| || || ||||| |||||||| |||||||| || Sbjct 271807 GATCGAGCGTGTATCGGAGATCCATCGAAGAGCCCAGTCGGCCTTGCGCTTGACGCAGGG 271866 Query 133116 CATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTC-CGAGGAACGC--ACGTAGGT 133172 || ||||| | ||| | || | || ||| | || |||| | | | |||||| Sbjct 271867 GATGGTTTCAACGGCATCGAAGA---GGTGTTCCCGTTGGCGAGCATCTTTAATGTAGGT 271923 Query 133173 GTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTA 133232 |||||||||| || || |||| ||||| | ||||||||| |||||| || ||||| Sbjct 271924 GTCGATGAGGAGTGAGTATGTTTCAGAGTGAATGTTCTCCATCATGATTTGGAACCCGTA 271983 Query 133233 AAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTT 133292 ||||||||||| || | |||||||||| | || |||||||||||| ||||| ||||| Sbjct 271984 GAAGCACCGCGCTTCAGCAGCCTGCACTTCATTAGAGAAACGCTCGACGAGATTCTCGTT 272043 Query 133293 GACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTT 133352 ||| || || || |||||||| || || || ||||| ||||||||| |||||||| Sbjct 272044 GACAATCCCATCAGAAGCGGCGAAGAATGCGAGGACGTGTGAGATGAAATGACGCTCGTT 272103 Query 133353 GTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGT 133409 ||||||| ||| | ||||||| || |||||| ||||| |||| ||| ||| |||| Sbjct 272104 TTCGTTCATGCGGTTGTTCCAGTCGTGCAAGTCCTTCGACAGATCCATCTCTTCGGCGGT 272163 Query 133410 CCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||| || || || ||||| || |||||||| Sbjct 272164 CCAGAATGAGGCTTCGGCCTTCTTGTACAT 272193 Score = 136 bits (150), Expect = 4e-27 Identities = 380/580 (66%), Gaps = 11/580 (2%) Strand=Plus/Minus Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935 || ||| |||| | || || |||||| || ||| || || ||||| | || | Sbjct 273879 CAGATGGGTGAATAACAGGCTAGCAAACTCTGTATGTAACCCTTCGTCACGACTGATCAA 273820 Query 132936 TTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGC 132995 ||||||| | |||| || ||||| || || || || || | ||||||||||| || Sbjct 273819 TTCGTTGGAATAGGTCAGTCCTGGCATAAGACCTCGCTTCTTTATCCAAAATATGGAAGC 273760 Query 132996 GAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAA 133055 || ||| || || |||| ||||| || || ||||||||||||| || || | || Sbjct 273759 AAAGGAGCCGGAGAAAAAGATTCCCTCCACCGCAGCGAAAGCCACCAAACGTTCAGCAAA 273700 Query 133056 CGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGG 133115 | | || ||| | |||||||| | ||||| || ||||| | || ||| || Sbjct 273699 AGATGTTTGTTTATCCGATATCCAGCGGATTGCCCAGTCAGCCTTCCGTCGGATGCAAGG 273640 Query 133116 CATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCG--AGGAAC--GCACGTAGG 133171 || ||||| || |||| ||||| || || | | || || | | ||||| Sbjct 273639 AATGGTTTCTATCGCGT----CAAACAGATATTGCCGTTCGGTTGGGTCTTTGATGTAGG 273584 Query 133172 TGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGT 133231 |||| ||||| || || || ||||| | ||| ||||| ||||| || || | Sbjct 273583 TGTCTATGAGAAGAGAGTATGCCTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCAT 273524 Query 133232 AAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGT 133291 |||| || ||||| || |||| ||||| || | | || || || || || || |||| Sbjct 273523 AAAAACATCGCGCTTCTGCCACTTGCACCTCGTTTGAAAACCGTTCTACTAGGTTCTCGT 273464 Query 133292 TGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGT 133351 | || || || || || ||||| || || || || | | ||||| || || Sbjct 273463 TCACTATTCCATCTGACGCAGCGAAGAAAGCAAGAACCCGGGATACGAAATATCGTTCAC 273404 Query 133352 TGTCGTTCAA---GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGG 133408 ||||||| || | | | |||||| | ||| || || | ||| | || ||| | | Sbjct 273403 TGTCGTTTAAACGGTGGTTCCAGTCCATCAAGTCGTTAGATAAGTCTATTTCTTCGGCAG 273344 Query 133409 TCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACAT 133448 |||| || ||||| || ||| ||||||||| | ||| || Sbjct 273343 TCCAGAATGACGCTTCTGCTCGTTTGTACATTCGCCATAT 273304 >seq2416 Length=74831 Score = 237 bits (262), Expect = 2e-57 Identities = 386/552 (70%), Gaps = 9/552 (2%) Strand=Plus/Minus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953 ||| ||||||||| |||| ||||||||| | | ||||| || ||| ||| ||||| Sbjct 67252 GCAGGCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCATTGGAGAAGGTCAA 67193 Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013 ||| ||||| || || || || || | ||| || ||||||||||| || || ||||| Sbjct 67192 GCCAGGCATCAGCCCTCGCTTCTTCATCCAGAAGATGGCGGCGAATGAACCGGAGAAGAA 67133 Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGC 133073 | ||| || || || || || || || ||||| || ||||| || | ||| | Sbjct 67132 AATGCCTTCTACCGCTGCAAACGCGACAAGGCGTTCACCGAATGTTGAACGCTTGTCCGA 67073 Query 133074 GATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTT 133133 |||||| || || ||||| || ||||| ||||| || || || ||||| | || | Sbjct 67072 GATCCATCGGAGAGCCCAGTCAGCCTTACGCTTGACACAAGGAATGGTTTCAACAGCATC 67013 Query 133134 CAACAAACGGAGTTTCTCTTC-CGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATA 133190 || | || ||| || ||||| | | |||||||||||||||| || || Sbjct 67012 GAAGA---GGTGTTCGCGTTGTCGAGGGTCTTTGATGTAGGTGTCGATGAGGAGGGAGTA 66956 Query 133191 CATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGAC 133250 | || || || | || ||||| ||| || || ||||| || || ||||| ||| | Sbjct 66955 TGTCTCGGAATGAATATTTTCCATCATGATCTGGAAACCGTAGAAACAACGCGCTTCGGC 66896 Query 133251 CACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGC 133310 |||| ||||| | | |||||| || || || |||||||| || |||||||| || Sbjct 66895 GGCCTGAACTTCATTTGAGAAACGTTCCACGAGGTTTTCGTTAACAATGCCGTCTGAAGC 66836 Query 133311 GGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTC 133367 |||||| || || || || || |||||| || ||||||||||| |||| ||| | Sbjct 66835 GGCGAAGAAAGCGAGGACATGAGAGATGAAGTGACGCTCGTTGTCATTCATGCGGTTGTT 66776 Query 133368 CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 ||||||| || ||| ||||| || |||| || || | ||||| || || || || || Sbjct 66775 CCAGTCGTGCAAGTCTTTGGATAGATCCATTTCTTCCGCAGTCCAGAATGATGCTTCTGC 66716 Query 133428 TTTTTTGTACAT 133439 |||||||||||| Sbjct 66715 TTTTTTGTACAT 66704 >seq2206 Length=69542 Score = 123 bits (136), Expect = 2e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || |||||||| || || || ||| | || |||||| | || Sbjct 41280 ATGCAAATCTTCGTCAAGACCCTCACGGGTAAGACGATTACCCTGGAGGTCGAGTCGTCC 41221 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | ||| || | ||||| || |||||||| ||||||| Sbjct 41220 GACACCATTGACAACG-TGAAGGCAAAGATTCAGGACAAGGAAGGAATTCCTCCCGACCA 41162 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||||| ||| || || ||||| || || | ||| || || |||||| || Sbjct 41161 ACAGCGTCTCATTTTCGCCGGGAAGCAGCTCGAAGATGGGCGTACTCTTTCCGACTATAA 41102 Query 38423 CATCCAAAAGGA 38434 ||| || ||||| Sbjct 41101 CATTCAGAAGGA 41090 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || |||||||| || || ||||| | || || ||| | || Sbjct 41508 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACTTTGGAGGTGGAGTCTTCC 41449 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || || | ||||| || || ||||| | ||||| Sbjct 41448 GACACCATCGACAATGTGAAGGCCAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAG 41389 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || || | ||| ||||| || || || |||| || || || ||||||||| Sbjct 41388 CAACGTCTGATCTTCGCTGGCAAGCAACTCGAGGACGGTCGTACTCTTTCTGACTACAAC 41329 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || ||||| || | || || || | ||||| ||| Sbjct 41328 ATTCAAAAAGAGTCTACACTTCACCTCGTGCTTCGT 41293 >seq1986 Length=559288 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| |||||||| |||| |||||| | | Sbjct 253864 ATGCAAATTTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCGCCT 253805 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| || || || || ||||||| Sbjct 253804 GACACCATCGATAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCGCCCGACCA 253746 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | |||| || || || ||||| || || | || ||||| |||||||| Sbjct 253745 ACAACGATTGATTTTTGCTGGAAAGCAGCTTGAGGATGGTCGTACCCTATCGGACTACAA 253686 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || |||||| | || || || | || || ||| | | ||||| Sbjct 253685 CATTCAGAAGGAATCCACTCTTCACCTTGTCCTCCGTCTCCGTGGCGG 253638 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/212 (70%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || |||||||| || || ||||| || | || || ||| | | Sbjct 253133 ATGCAAATTTTTGTCAAGACGCTCACCGGAAAGACCATTACTCTTGAGGTTGAGTCTTCG 253074 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| || || || ||| | || || Sbjct 253073 GACACCATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGCATACCCCCTGATCA 253015 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | || || || ||| |||| || | ||||| ||| || ||||| Sbjct 253014 ACAGCGTTTGATCTTTGCTGGAAAGCAGTTGGAGGATGGTCGCACTCTCTCGGATTACAA 252955 Query 38423 CATCCAAAAGGAAGCGACGCTGCA-TTTGGTG 38453 |||||| ||||| |||| || || |||||| Sbjct 252954 CATCCAGAAGGAGTCGACTCTTCACCTTGGTG 252923 >seq2370 Length=49093 Score = 82.4 bits (90), Expect = 8e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 38347 GAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCA 38406 |||||||| | ||||| ||||| || || | || || |||||||| || || | |||| Sbjct 22966 GAATTCCCCCTGACCAGCAGCGTCTGATCTTTGCTGGAAAACAGCTCGAAGATGGCCGCA 22907 Query 38407 CCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 | |||| ||||||||||| || ||||| | || || || |||||| ||||| Sbjct 22906 CTCTCAGTGACTACAACATTCAGAAGGAGTCTACCCTTCACTTGGTGTTGCGT 22854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500156813226880