Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1627 224 1e-53 seq1982 104 3e-17 seq2372 102 1e-16 seq1573 82.4 1e-10 >seq1627 Length=307702 Score = 224 bits (248), Expect = 1e-53 Identities = 552/848 (65%), Gaps = 57/848 (7%) Strand=Plus/Plus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | ||| || || ||||| | || ||||| ||||| |||||||||||||| Sbjct 221167 TCACCAGAAAGGATAGCAGCCTGGACGGCAGCTCCGTAGGCGACGGCCTCATCGGGGTTG 221226 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || || || || | || || | | | ||| | |||| Sbjct 221227 ATGCTCTTGTTGGGCTCCTTGCCATTGAAGAAGTCGGAGACGAGCT--TGACGATACGGG 221284 Query 7130 --ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTG 7187 || || || || ||||| || | || || || | || || || || || ||||| | Sbjct 221285 GAATACGAGTAGAACCACCAACGAGGACAATCTCGTGGACGTTGGACTTGTCAATCTTGG 221344 Query 7188 AGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTT 7247 |||| || || || || ||||| || | | ||||| | |||| || |||| Sbjct 221345 AGTCCCGGAGGACCTTCTCAACAGGGTCAAGGGTGCTTCGGAAGAGGTCCTGGCAGAGTT 221404 Query 7248 CCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAA 7307 |||| ||||| ||||| || | ||| || |||||||| | ||| || | | || || | Sbjct 221405 CCTCGAAACGAGCACGAGTGAGGGACGTGTAGAAATCGATGCCCTCAAAGAGAGAGTCGA 221464 Query 7308 TTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTC 7367 |||| |||| || || || | || || | || ||||| || ||||| || || || | Sbjct 221465 TTTCGATGGAGGTCTGGGCAGCTGAGGAGAGGGTACGCTTGGCACGCTCGCAAGCGGTCC 221524 Query 7368 GTAAACGACGAAGGGCACGCGGGTT--------------------ACCG--------GAA 7399 | | |||||| |||||||| ||||| || | ||| Sbjct 221525 GGAGACGACGGAGGGCACGGGGGTTGGTGGACAAGTCTAGGGCTTACGGTCAGTATTGAA 221584 Query 7400 ATAT-------------------------CTTTCTTATGTTTACGTTTAAACTCTTCAGA 7434 ||| | ||||| | ||||| || ||||||| Sbjct 221585 CTATTCGAGACGATGCAGGAATCACTTACCCTTCTTGTTCTTACGCTTGAACTCTTGGAC 221644 Query 7435 GAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGT 7494 |||||| | ||| | ||| || || |||||||| | ||| ||||| || ||||| Sbjct 221645 GAAGTGATTGACGAGACGGTTATCAAAGTCCTCACCACCAAGGTGAGTATCACCAGCGGT 221704 Query 7495 CGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACC 7554 || ||||| || ||||||||| |||||||| | || | || |||||||| || || || Sbjct 221705 GGCCTTGACCTCGAAGATACCTTCTTCAATGGTCAAGAGGGAGACATCAAAGGTTCCTCC 221764 Query 7555 ACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGC 7614 || || || || ||||| ||||| ||| | | ||||| ||||||||||| || Sbjct 221765 CCCGAGATCGAAGATGAGAACGTTACGCTCGCCCTGAACCTTCTTGTCGAGACCGTAGGC 221824 Query 7615 GATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGC 7674 || || || || || || || || || ||||| ||| ||| || |||| ||| ||| | Sbjct 221825 AATGGCAGCGGCAGTAGGCTCGTTGATGATACGGAGAACGTTGAGACCAGAAATGGTTCC 221884 Query 7675 CGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGC 7734 || || || || || || ||||| ||||| || |||||||| ||||| || ||||| || Sbjct 221885 GGCGTCCTTGGTTGCCTGACGTTGGGAATCATTGAAGTAGGCAGGGACGGTGACGACAGC 221944 Query 7735 GTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCAT 7794 || | || | ||| ||||| | || || | |||||||| || |||||||| Sbjct 221945 GTTCTGGATGGTACCACCAAGATAGGCCTCAGCAGTTTCTTTCATCTTCAAGAGAACCAT 222004 Query 7795 CGATGAAA 7802 || |||| Sbjct 222005 GGAAGAAA 222012 Score = 165 bits (182), Expect = 1e-35 Identities = 268/381 (70%), Gaps = 6/381 (2%) Strand=Plus/Plus Query 7345 CTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATC 7404 |||||| ||||| || || |||| | ||| || |||||||| || | |||| ||||| Sbjct 112027 CTTTGCACGCTCGCATGCACTTCGGAGACGTCGGAGGGCACGGGGATCGTCGGAGATATC 112086 Query 7405 TTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAAT 7463 | ||| ||| || || ||||| | |||||| || || ||| | ||||| | Sbjct 112087 GTGCTTGGATTTGCGCTTGAACTCGTTCTTGAAGTGCTCCAAA-AGTGTGTTGTCGAAGT 112145 Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAA 7523 | |||||||||||||| || || || || || || ||||| |||| |||||| | Sbjct 112146 CCTCACCACCCAAGTGAGTGTCACCGGCTGTGGCCTTGACGCTGAAGACACCTCCACTGA 112205 Query 7524 TGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTAT 7583 |||| || | |||||||| || || || ||||| || || |||||||| |||||| | | Sbjct 112206 TGTTCAAAAGAGAAACATCGAAGGTTCCTCCACCAAGATCGAAAATGAGAACGTTCTTCT 112265 Query 7584 CGTCGTCTTTG--TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAAT 7641 | | ||| | | || |||||||| || ||||| || || || || || || || Sbjct 112266 C--AGCCTTGGATTGGCGGTCAAGACCGTAGGCAATAGCGGCAGCAGTGGGCTCGTTGAT 112323 Query 7642 AATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGA 7701 ||||||||| | || ||||| |||| | |||||||| || || | ||||| || Sbjct 112324 GATACGAAGAACATCGAGACCAGCGATAGCACCAGCATCTTTGGTTGCAAGACGTTGGGA 112383 Query 7702 ATCGTTAAAGTAGGCCGGGAC 7722 ||||| |||||||| || || Sbjct 112384 GTCGTTGAAGTAGGCAGGAAC 112404 Score = 114 bits (126), Expect = 2e-20 Identities = 117/152 (77%), Gaps = 3/152 (2%) Strand=Plus/Plus Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| | |||||||||||| |||||||| || || || ||||| ||||| || | Sbjct 222276 GTGTTATGGGGGTTCATGGCGACCTGGTTCTTTGCGGCATCACCGATGAGACGCTCCGTG 222335 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 | ||| || | ||||||||| || |||||||| || |||||||| || || || ||| Sbjct 222336 T---CCGAGAAGGAGACGTACGAAGGCGTCGTTCGGTTACCTTGGTCATTGGCGATGATT 222392 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || ||||| ||||||||||| || ||||| Sbjct 222393 TCGACTCGGTCATTTTGCCAGACACCAACGCA 222424 >seq1982 Length=80753 Score = 104 bits (114), Expect = 3e-17 Identities = 178/256 (70%), Gaps = 3/256 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||||||||| | ||| ||||| || ||||| || ||| ||||||| || Sbjct 45643 TCGAAATCTTCACCACCAAGGTGGGTATCACCTGCGGTAGCGAGGACCTCAAAGACGCCA 45702 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | || ||||| || ||||| || || ||||| ||| || | Sbjct 45703 TCGTCAATGGAGAGAAGGGAGACATCGAAGGTACCTCCTCCGAGGTCGTAAACGATGATT 45762 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | || || || | ||||| | ||||||||| ||||| || || || || || || Sbjct 45763 TGCG-AT--TCACCACCCTTCTTGTTGAGACCGTAGGCGATGGCGGCGGCGGTAGGCTCG 45819 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 ||||| ||||| ||| | || ||||| || ||| | || || || || || || || Sbjct 45820 TTAATGATACGGAGAACCTGGAGACCAGCGATCGTTCCGGCGTCCTTGGTAGCCTGACGC 45879 Query 7697 TGCGAATCGTTAAAGT 7712 || | ||||| |||| Sbjct 45880 TGAGCGTCGTTGAAGT 45895 >seq2372 Length=127870 Score = 102 bits (112), Expect = 1e-16 Identities = 212/310 (68%), Gaps = 8/310 (3%) Strand=Plus/Minus Query 22443 ATTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGA 22502 ||| || || || || || || ||||||||||| || || ||| ||||| || | || Sbjct 113813 ATTCTACCAAGCTTCGACTTCTGAGCTCTACGGAAAGGTCGTTGAGACTCCTCAGACGGA 113754 Query 22503 AAATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGGC 22562 || || || || ||||||||| ||||| || || || ||| | | |||| Sbjct 113753 GAAAACGCCATTCTACCCGCGTAGTCCATACGGCTGCGCAAAGTTGTACGCGTTTTGGAT 113694 Query 22563 GACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCA 22622 || || || || | ||| |||| || |||| ||| || || ||||| | |||||||| Sbjct 113693 CACTGTCAACTACCGTGAAGCATATGGCATGTATGCGTGTAACGGTATCCTCTTCAACCA 113634 Query 22623 CGAA--TCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGC- 22679 |||| || ||| || || ||| | |||||||| | ||||| || | || || Sbjct 113633 CGAAAGTCCCCG-GAGAGGAAGAACA-TTCGTGACGAGGAAAATCTCAAGGGCAGTTGCA 113576 Query 22680 -TAATATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAG 22738 |||||| || || || ||| ||| | |||||||| ||||| ||||| |||| | Sbjct 113575 GAAATATCCGT--TGGAAAGCAAGCGTGTCTTTACCTTGGAAACCTTGATGCCCAACGTG 113518 Query 22739 ATTGGGGTCA 22748 ||||||| || Sbjct 113517 ATTGGGGCCA 113508 >seq1573 Length=133326 Score = 82.4 bits (90), Expect = 1e-10 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 105825 GTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGT 105884 ||||| ||| | |||||||| ||||| ||||| ||||| || || || || | || Sbjct 58302 GTGAATGTGAAGGCCAATACCACCAGCACACTTGCTGATCATAGCGCATTCCTTAAGAGT 58243 Query 105885 ATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTG 105944 |||||| || || || || || ||||| | || | ||||||||||| || | || Sbjct 58242 ATCGTAGATGCCTTCTATTGAGTCGTCCTTCATGGCGACGAGGAAACACGAAGAGAGCTG 58183 Query 105945 TGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAA 105992 | |||||||| || ||||| |||||||| | ||| ||| |||| Sbjct 58182 AGCATGAGGTGTACCGGCGTTGAAGAGAGTTGGGGATGCGTGAGTGAA 58135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635112499567880