Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2123 86.0 8e-12 seq2416 82.4 9e-11 seq1573 82.4 9e-11 >seq2123 Length=425399 Score = 86.0 bits (94), Expect = 8e-12 Identities = 285/435 (66%), Gaps = 14/435 (3%) Strand=Plus/Plus Query 101904 CTGGCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATATCAATAACAAC--TTTG 101961 || || ||||| |||| ||| |||||||| || ||||| | | | ||| ||| Sbjct 273430 CTTGCTTTCTTCGCTGCGTCAGATGGAATAGTGAACGAGAACCT--AGTAGAACGGTTTT 273487 Query 101962 CTGATGAGGTGCAATCCTCTGAAGCGAGATCTTTCTATGCGTATCAATGTCATAATG-AA 102020 | | ||||||||| | |||||| ||| ||| |||| || || | | || ||| || Sbjct 273488 CAAACGAGGTGCAAGTGGCAGAAGCGCGATGTTTTTATG-GTTTCCAAATTATGATGGAA 273546 Query 102021 ATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAG 102080 | | || ||| ||||| | |||||||||| || || || || | || Sbjct 273547 AACATCCACTCCGAGGCATACTCTCTTCTCATAGACACCTACATCAAAGACCCAACCGAA 273606 Query 102081 AAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGG 102140 | | | || ||||| || || |||| |||| || || | | ||| || || ||| Sbjct 273607 CGGCAATATCTGTTTGACGCGATAGAAACCATTCCTTGCATCCGACGGAAGGCTGACTGG 273666 Query 102141 GCTATGAAGTGGTTT---GATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTT 102197 || || ||| | |||| | | | || |||||||| || | | || || Sbjct 273667 GCAATCCGCTGGATATCGGATAAACAAACA---TCTTTTGCTGAACGTTTGGTGGCTTTC 273723 Query 102198 GCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAA 102256 || || ||||| ||||| ||||| || ||||| ||| | || | |||| | ||||| Sbjct 273724 GCTGCGGTGGAGGGAATCTTTTTCTCCGGCTCCTT-TGCTTCCATATTTTGGATAAAGAA 273782 Query 102257 GCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACT 102316 ||||||||| |||||||| || || |||||||| | ||| ||||||||| || | Sbjct 273783 GCGAGGTCTTATGCCAGGACTGACCTATTCCAACGAATTGATCAGTCGTGACGAAGGGTT 273842 Query 102317 CCACCAAGAGTTTGC 102331 || ||||||||| Sbjct 273843 ACATACAGAGTTTGC 273857 >seq2416 Length=74831 Score = 82.4 bits (90), Expect = 9e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 102179 TGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGC 102238 ||| || || |||| ||||| || || || || |||||||| ||||| ||| ||| Sbjct 67096 TGAACGCCTTGTCGCGTTTGCAGCGGTAGAAGGCATTTTCTTCTCCGGTTCATTCGCCGC 67155 Query 102239 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298 || | ||| | ||||||||||| || ||||| || | ||||||||| ||||| || Sbjct 67156 CATCTTCTGGATGAAGAAGCGAGGGCTGATGCCTGGCTTGACCTTCTCCAATGAGCTCAT 67215 Query 102299 CTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 | ||||||||||| | ||| || ||||| Sbjct 67216 CAGCCGTGACGAGGGCATGCACACCGACTTTGC 67248 >seq1573 Length=133326 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 112124 CATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGG 112183 ||||||| | || || | ||||||| ||||| || || ||||| || | ||||| || Sbjct 58655 CATGAAGCGTGTCGAAGCTGGTGGCAACTGGTCACTGTTCTGTCCTAACGAAGCACCTGG 58714 Query 112184 TCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAG 112243 ||| | |||| | |||| ||||| || ||||||||| || |||||| |||| | Sbjct 58715 TCTTCCTGATGTCTACGGTGCCGAGTTCGAGGCCCTCTACGAGAAATACGAGAGAGAAGG 58774 Query 112244 TCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAAC 112303 ||| || || ||| | || || | | ||| | || |||||| || | || Sbjct 58775 TCGCGCTCGTGAGACTATTCCTGCCCAGAAACTCTGGTATGCCATTCTCGAGGCACAGGT 58834 Query 112304 CGAGACTGGTACACC 112318 ||||||||||||||| Sbjct 58835 CGAGACTGGTACACC 58849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620722559521040