Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2123 105 8e-18 seq1573 100 3e-16 seq2416 91.5 2e-13 >seq2123 Length=425399 Score = 105 bits (116), Expect = 8e-18 Identities = 341/521 (65%), Gaps = 9/521 (2%) Strand=Plus/Plus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| | ||||| || ||| ||| |||||||| ||||| | || Sbjct 271649 GCAAAATCGGTGTGCATGCCCTCGTCACGGCTAATGAGTTCATTGGAGAACGTCAATCCG 271708 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||| | ||| |||||||||| ||| ||||||| ||| ||||| |||||||||||| Sbjct 271709 GGCATCAAACCACGCTTCTTCATCCAGAAAATAGCAGCGAACGACCCCGAGAAGAAGATA 271768 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAA 117452 ||||| || || || |||| || ||||| | || || |||| | | | | | Sbjct 271769 CCCTCGACGGCAGCGAAGGCAACCAGACGCTC-ACCAAAGATCGAGCGTGTATCGGAGAT 271827 Query 117453 CCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 117512 |||| | ||||| | ||||| || | || || | |||| | ||| || || Sbjct 271828 CCATCGAAGAGCCCAGTCGGCCTTGCGCTTGACGCAGGGGATGGTTTCAACGGCATCGAA 271887 Query 117513 TAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTC 117572 | || | | || |||| |||||||| |||| || | ||| |||||||| Sbjct 271888 GAGGTGTTCCCGTTGGCGAGCATCTTTAATGTAGGTGTCGATGAGGAGTGAGTATGTTTC 271947 Query 117573 GCCATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCT 117631 |||| | | ||| || | ||| | ||||||| | |||||||| || Sbjct 271948 AGAGTGAATGTTCTCCATCAT-GATTTGGAACCCGTAGAAGCACCGCGCTTCAGCAGCCT 272006 Query 117632 GCACTTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAA 117691 ||||||||| | ||| | || |||||| ||||| ||||| || | || | Sbjct 272007 GCACTTCATTAGAGAAACGCTCGACGAGATTCTCGTTGACAATCCCATCAGAAGCGGCGA 272066 Query 117692 AGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGT 117748 ||||||| |||| || ||||| | || ||||| |||| || | ||||||| Sbjct 272067 AGAATGCGAGGACGTGTGAGATGAAATGACGCTCGTTTTCGTTCATGCGGTTGTTCCAGT 272126 Query 117749 CGT-CAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 ||| |||| || || |||| ||| | ||||| || ||||| Sbjct 272127 CGTGCAAG-TCCTTCGACAGATCCATCTCTTCGGCGGTCCA 272166 >seq1573 Length=133326 Score = 100 bits (110), Expect = 3e-16 Identities = 181/262 (69%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 107051 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 107110 || ||||| | |||||||| ||||| ||||| ||| || || ||| ||||||| Sbjct 58301 TGAATGTGAAGGCCAATACCACCAGCACACTTGCTGATCATAGCGCATTCCTTAAGAGTA 58242 Query 107111 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 107170 | ||||| || | |||||||| ||||| |||||| ||||| || || | ||| Sbjct 58241 TCGTAGATGCCTTCTATTGAGTCGTCCTTCATGGCGACGAGGAAACACGAAGAGAGCTGA 58182 Query 107171 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGA 107229 | |||||||| || |||||||| ||||| | ||||||| |||| ||||| | || Sbjct 58181 GCATGAGGTGTACCGGCGTTGAAGAGAGTTGGGGATGCGTGAGTGAAG-TACCTCTCAGA 58123 Query 107230 CATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCAC 107289 ||| || || || | | || || ||||| ||||||||||| | ||| Sbjct 58122 CATGAGATCATACGTTTGGAGAACTCGCTCGATGTCACGGCCGTGGATGCCAACGGCGCA 58063 Query 107290 ACGCATAAACATGTATTGGGGT 107311 |||||| | ||| | ||||||| Sbjct 58062 ACGCATGATCATATGTTGGGGT 58041 >seq2416 Length=74831 Score = 91.5 bits (100), Expect = 2e-13 Identities = 343/525 (65%), Gaps = 15/525 (3%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| | ||||| || ||| || || ||||| |||||| | ||| Sbjct 67249 GGCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCATTGGAGAAGGTCAAGCC 67190 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 ||||| || || |||||||||| ||| | || ||| |||||| ||||||||||| || Sbjct 67189 AGGCATCAGCCCTCGCTTCTTCATCCAGAAGATGGCGGCGAATGAACCGGAGAAGAAAAT 67130 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA-A 117451 || || || |||||||| | |||||| || |||| | || |||| | | Sbjct 67129 GCCTTCTACCGCTGCAAACGCGACAAGGCGTTCACCGAATG-TTGAACGCTTGTCCGAGA 67071 Query 117452 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAA 117511 |||| | ||||| | ||||| || | ||| || | |||| | || || | Sbjct 67070 TCCATCGGAGAGCCCAGTCAGCCTTACGCTTGACACAAGGAATGGTTTCAACAGCATCGA 67011 Query 117512 ATAACTGCTTC---TTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATG 117568 | | || ||| || || || || || ||||| |||| || | || |||| Sbjct 67010 AGAGGTG-TTCGCGTTGTC-GA-GGGTCTTTGATGTAGGTGTCGATGAGGAGGGAGTATG 66954 Query 117569 TTTCGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTT 117627 | ||| ||||| ||| ||| ||| | || | ||||||| | ||||||||| Sbjct 66953 TCTCGGAATGAATATTTTCCATCATGATCTGGA-AACCGTAGAAACAACGCGCTTCGGCG 66895 Query 117628 ATCTGCACTTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCA 117687 ||| ||||||| | ||| | || || || |||||| || || || | Sbjct 66894 GCCTGAACTTCATTTGAGAAACGTTCCACGAGGTTTTCGTTAACAATGCCGTCTGAAGCG 66835 Query 117688 GCAAAGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTC 117744 || ||||| || |||| | ||||| | || || ||||||| || | ||| Sbjct 66834 GCGAAGAAAGCGAGGACATGAGAGATGAAGTGACGCTCGTTGTCATTCATGCGGTTGTTC 66775 Query 117745 CAGTCGT-CAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 ||||||| |||| |||||||| | ||| | ||||||||||||||| Sbjct 66774 CAGTCGTGCAAG-TCTTTGGATAGATCCATTTCTTCCGCAGTCCA 66731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589961942738680