Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq2206 181 2e-40 seq1986 165 2e-35 >seq2206 Length=69542 Score = 181 bits (200), Expect = 2e-40 Identities = 165/208 (79%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 ||||||| ||||| ||||| || ||||| || || |||| |||||| | ||||||||||| Sbjct 41073 CAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTTCGA 41132 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||||||| || ||||| || || || |||||||| |||||||| ||||| ||||| |||| Sbjct 41133 GCTGCTTCCCGGCGAAAATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCCTGAA 41192 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | ||| ||| ||||| ||||||||||| || || || || ||||||| |||||| | Sbjct 41193 TCTTTGCCTTCACGTTGTCAATGGTGTCGGACGACTCGACCTCCAGGGTAATCGTCTTAC 41252 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || | || || ||||| | |||||| Sbjct 41253 CCGTGAGGGTCTTGACGAAGATTTGCAT 41280 Score = 156 bits (172), Expect = 9e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || |||||||||||||| ||||| || | |||||| | || || ||| Sbjct 41300 ACGAGGTGAAGTGTAGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCG 41359 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || |||||||| || ||||| ||||| |||||||||||||| ||||| ||| Sbjct 41360 AGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGA 41419 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || |||||||| ||| ||||| || | || | |||||| Sbjct 41420 ATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCCACCTCCAAAGTGATCGTCTTA 41479 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 41480 CCCGTGAGGGTCTTGACGAAGATCTGCAT 41508 Score = 98.7 bits (108), Expect = 2e-15 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||| | ||| ||||| || || || |||||||| ||||| |||||||| | ||| || | Sbjct 41802 GAGACGCAAGACAAGATGGAGGGTCGACTCTTTCTGAATGTTGTAATCAGAAAGGGTGCG 41861 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 || || ||||||||||| || |||||||| ||||||||||| || || || || Sbjct 41862 TCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGTCGTTGTTGATCAGGGGGGAT 41915 >seq1986 Length=559288 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| || |||||||| || || || ||||||| || || | ||||||||| Sbjct 253153 ACAAGGTGAAGGGTCGACTCTTTCTGGATGTTATAATCGGAGAGGGTACGGCCATCTTCG 253212 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || || || ||||| ||||| ||||| || || |||||||| ||||| ||| Sbjct 253213 AGCTGTTTTCCAGCAAAAATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGA 253272 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || |||||||||||| || ||||| || || | ||| ||| Sbjct 253273 ATCTTGGCCTTTACATTGTCGATGGTGTCCGAAGACTCGACTTCGAGCGTTATCGTTTTT 253332 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || ||||| || ||||| | |||||| Sbjct 253333 CCGGTTAAAGTCTTCACGAAGATTTGCAT 253361 Score = 154 bits (170), Expect = 3e-32 Identities = 159/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 ||||||||||||| ||||| || || || |||||||||| || || | |||||||||| Sbjct 253429 CAAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAATCGGAGAGGGTACGACCATCTTCGA 253488 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||||||| || ||||| ||||| ||||| ||||| || || || || || ||||| || | Sbjct 253489 GCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGA 253548 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||| ||||| || || || ||||| || || ||||| |||| ||||||| Sbjct 253549 TCTTGGCCTTTACGTTGTCGATAGTATCCGACGACTCGACCTCAAGTGTAATGGTCTTTC 253608 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||||||| || || || | ||||| Sbjct 253609 CGGTCAAAGTCTTCACAAAGATCTGCAT 253636 Score = 150 bits (166), Expect = 4e-31 Identities = 158/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 ||||||||||||| ||||| || || || |||||||| | ||||| | ||||| || | Sbjct 252926 CAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCA 252985 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 |||||| || || ||||| | || ||||| || || || |||||||| ||||| || | Sbjct 252986 ACTGCTTTCCAGCAAAGATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTTGTCCTGGA 253045 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||||||||| ||||||||||||||| || || ||||| |||| ||||||| Sbjct 253046 TCTTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCAAGAGTAATGGTCTTTC 253105 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || | || || || || | |||||| Sbjct 253106 CGGTGAGCGTCTTGACAAAAATTTGCAT 253133 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||||||||| || || ||||| ||||| || | || || | ||||| || Sbjct 253656 ACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCCGATAGGGTACGACCATCCTCA 253715 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || || || | |||||||||||| || || |||||||| ||||| || Sbjct 253716 AGCTGCTTTCCAGCAAAAATCAATCGTTGTTGGTCGGGCGGGATGCCTTCCTTGTCCTGG 253775 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || |||||||| | || || || || || | ||||| Sbjct 253776 ATCTTGGCCTTGACGTTATCGATGGTGTCAGGCGACTCGACCTCGAGAGTGATGGTCTTG 253835 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | |||||| Sbjct 253836 CCAGTGAGGGTCTTGACGAAAATTTGCAT 253864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109445251649219