Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq2123 129 7e-25 >seq2123 Length=425399 Score = 129 bits (142), Expect = 7e-25 Identities = 287/431 (67%), Gaps = 0/431 (0%) Strand=Plus/Minus Query 37179 GCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCT 37238 ||||| || |||||| ||||| || | ||| |||||||| || ||| |||| | |||| Sbjct 273857 GCAAACTCTGTATGTAACCCTTCGTCACGACTGATCAATTCGTTGGAATAGGTCAGTCCT 273798 Query 37239 GGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATA 37298 ||||| | ||||| || || ||||||||||| | ||||| || || || || || || Sbjct 273797 GGCATAAGACCTCGCTTCTTTATCCAAAATATGGAAGCAAAGGAGCCGGAGAAAAAGATT 273738 Query 37299 CCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATC 37358 || || || || || || || || | |||| | | |||| || | ||| || ||| Sbjct 273737 CCCTCCACCGCAGCGAAAGCCACCAAACGTTCAGCAAAAGATGTTTGTTTATCCGATATC 273678 Query 37359 CAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAG 37418 || ||| ||| || ||||| | | || ||| ||||| || || | || Sbjct 273677 CAGCGGATTGCCCAGTCAGCCTTCCGTCGGATGCAAGGAATGGTTTCTATCGCGTCAAAC 273618 Query 37419 AGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCA 37478 ||| | | ||| ||| | || || || || || || | | || || Sbjct 273617 AGATATTGCCGTTCGGTTGGGTCTTTGATGTAGGTGTCTATGAGAAGAGAGTATGCCTCG 273558 Query 37479 GAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGA 37538 ||||| || ||||| || || || |||||||||||||| | ||||| | | ||| Sbjct 273557 GAGTGGATGTTTTCCATCATAATTTGGAAACCATAAAAACATCGCGCTTCTGCCACTTGC 273498 Query 37539 ACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAG 37598 || ||||| |||||| | ||| ||| || || ||||| ||||| || || ||| Sbjct 273497 ACCTCGTTTGAAAACCGTTCTACTAGGTTCTCGTTCACTATTCCATCTGACGCAGCGAAG 273438 Query 37599 AAAGCAAGAAC 37609 ||||||||||| Sbjct 273437 AAAGCAAGAAC 273427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592297868074280