Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1986 120 2e-22 seq2206 100 2e-16 >seq1986 Length=559288 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| || || || || || || |||||||| | || ||| | |||| ||||| ||| Sbjct 252931 TGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCAACTGC 252990 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| ||||||||||||||||| || || |||||||| || || || || || Sbjct 252991 TTTCCAGCAAAGATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTTGTCCTGGATCTTG 253050 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | ||||| || | || || |||||||| | || || ||||| Sbjct 253051 GCCTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCAAGAGTAATGGTCTTTCCGGTG 253110 Query 101447 AAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 | || || ||||| || |||||| | | |||||| Sbjct 253111 AGCGTCTTGACAAAAATTTGCATGCCTCCACGAAGA 253146 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| || ||||| || || || ||||||| || || | | |||| || | || Sbjct 253159 TGAAGGGTCGACTCTTTCTGGATGTTATAATCGGAGAGGGTACGGCCATCTTCGAGCTGT 253218 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | ||| || || || || || |||||||| || || ||||| || Sbjct 253219 TTTCCAGCAAAAATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGAATCTTG 253278 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 |||||| | || | ||||| || | || ||||| || || | |||||| |||||| Sbjct 253279 GCCTTTACATTGTCGATGGTGTCCGAAGACTCGACTTCGAGCGTTATCGTTTTTCCGGTT 253338 Query 101447 AAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 ||||| || || || || |||||| | | |||||| Sbjct 253339 AAAGTCTTCACGAAGATTTGCATGCCTCCACGAAGA 253374 >seq2206 Length=69542 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| ||||| |||||||| || ||||| || | | ||| | | || || | |||| Sbjct 41306 TGAAGTGTAGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCGAGTTGC 41365 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || |||| ||| || || || || ||||||||||| || || ||||| || Sbjct 41366 TTGCCAGCGAAGATCAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTG 41425 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | ||||| || | ||||| || | ||||| ||| || || || Sbjct 41426 GCCTTCACATTGTCGATGGTGTCGGAAGACTCCACCTCCAAAGTGATCGTCTTACCCGTG 41485 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || || || |||||||| Sbjct 41486 AGGGTCTTGACGAAGATCTGCAT 41508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396266050602849