Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15]
2,557 sequences; 57,384,356 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq2206 98.7 8e-16
seq1986 95.1 9e-15
>seq2206
Length=69542
Score = 98.7 bits (108), Expect = 8e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634
|||||||||||| ||||| ||||| ||| | ||| |||| || | ||||| || || ||
Sbjct 41317 CTCTTTTTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCGAGTTGCTTGCCAGCGAA 41376
Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694
||||| || || || || | |||| ||| |||||||| |||||| || |||
Sbjct 41377 GATCAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTCACATT 41436
Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754
| | | || || | ||||||||||| || ||||| || ||||| | || || ||
Sbjct 41437 GTCGATGGTGTCGGAAGACTCCACCTCCAAAGTGATCGTCTTACCCGTGAGGGTCTTGAC 41496
Query 48755 AAAAATCTGCAT 48766
|| ||||||||
Sbjct 41497 GAAGATCTGCAT 41508
>seq1986
Length=559288
Score = 95.1 bits (104), Expect = 9e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634
||| || || || |||||||| || ||| | ||| | || ||||||||||| || |||||
Sbjct 252942 CTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCAACTGCTTTCCAGCAAA 253001
Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694
|||| ||||||||||| | ||| | ||| |||||||| ||||| || ||
Sbjct 253002 GATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 253061
Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754
| | | || || | ||| ||||| | ||||| || ||||| || | || || ||
Sbjct 253062 GTCAATGGTGTCCGAAGACTCAACCTCAAGAGTAATGGTCTTTCCGGTGAGCGTCTTGAC 253121
Query 48755 AAAAATCTGCAT 48766
|||||| |||||
Sbjct 253122 AAAAATTTGCAT 253133
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634
||| || || || |||||||| || || | ||| | || || | |||||| || || ||
Sbjct 253445 CTCCTTCTGGATGTTGTAATCGGAGAGGGTACGACCATCTTCGAGCTGCTTTCCAGCGAA 253504
Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694
|| || || || || || | || | ||||||||||| ||||| |||||
Sbjct 253505 AATAAGACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTGGCCTTTACGTT 253564
Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754
| | || || |||| ||| ||||| | ||||| || ||||| |||||||| || ||
Sbjct 253565 GTCGATAGTATCCGACGACTCGACCTCAAGTGTAATGGTCTTTCCGGTCAAAGTCTTCAC 253624
Query 48755 AAAAATCTGCAT 48766
||| ||||||||
Sbjct 253625 AAAGATCTGCAT 253636
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380925728674911
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |