Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2416 221 2e-52 seq2123 219 8e-52 >seq2416 Length=74831 Score = 221 bits (244), Expect = 2e-52 Identities = 441/649 (68%), Gaps = 16/649 (2%) Strand=Plus/Minus Query 48035 GTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACG----CGGGA 48090 ||||| ||||||| ||| |||| || ||||| | |||| |||| || ||||| Sbjct 67344 GTGAGGAACTCCTGCTCAATCTTGACTGCTTCGGTGATAATCCGCTTGACAGTGTCGGGA 67285 Query 48091 CTCTGAGGGTTTGTTGCG-CAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCA 48149 |||||| | || |||||| | | |||| | |||||||||||| |||||| Sbjct 67284 ---TGAGGGC--GACGCTTCAGGTGGCT---AAAGAGAAGGCAGGCAAAGTCGGTGTGCA 67233 Query 48150 AGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCT 48209 ||| ||||| |||||||||||| | ||||||||| | |||||||| | ||| | || Sbjct 67232 TGCCCTCGTCACGGCTGATGAGCTCATTGGAGAAGGTCAAGCCAGGCATCAGCCCTCGCT 67173 Query 48210 GTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGA 48269 || | |||||| || || ||||| || || |||||||| ||||| || || || || | Sbjct 67172 TCTTCATCCAGAAGATGGCGGCGAATGAACCGGAGAAGAAAATGCCTTCTACCGCTGCAA 67113 Query 48270 ACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGT 48329 ||||| || | || ||||| | | |||||| |||||||| || ||||||| Sbjct 67112 ACGCGACAAGGCGTTCACCGAATGTTGAACGCTTGTCCGAGATCCATCGGAGAGCCCAGT 67053 Query 48330 CTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCAC 48389 | ||||| ||||| || || || || || | || |||||| | | || | | Sbjct 67052 CAGCCTTACGCTTGACACAAGGAATGGTTTCAACAGCATCGAAGAGGTGTTCGCGTTGTC 66993 Query 48390 CTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTA 48449 | ||| | ||||| || || | ||| |||| || || | ||| || | Sbjct 66992 GAGGGTCTTTGATGTAGGTGTCGATGAGGAGGGAGTATGTCTCGGAATGAATATTTTCCA 66933 Query 48450 TAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATC 48509 | ||||||||| |||||||| | || || |||| ||||| | ||||| | Sbjct 66932 TCATGATCTGGAAACCGTAGAAACAACGCGCTTCGGCGGCCTGAACTTCATTTGAGAAAC 66873 Query 48510 TCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTT 48569 |||| || || || || || || || |||||||| || ||||| || |||||||| Sbjct 66872 GTTCCACGAGGTTTTCGTTAACAATGCCGTCTGAAGCGGCGAAGAAAGCGAGGACATGAG 66813 Query 48570 TAAGGAAATGGCGCTCGTTG---TGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCA 48626 | ||| || ||||||||| | || | |||||| | || | ||||||| | Sbjct 66812 AGATGAAGTGACGCTCGTTGTCATTCATGCGGTTGTTCCAGTCGTGCAAGTCTTTGGATA 66753 Query 48627 GGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACAT 48675 | |||| ||||||| |||||||||| || || ||||||||||||||| Sbjct 66752 GATCCATTTCTTCCGCAGTCCAGAATGATGCTTCTGCTTTTTTGTACAT 66704 Score = 84.2 bits (92), Expect = 4e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 47852 ACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAG 47911 |||| ||||| |||||||||||||| || | |||||| || | ||||||||| |||| Sbjct 67582 ACTCGCTTCTCGAAGAAGTTTGTCTTTCCTTGCAACGAAATCATGTCCATGAAGTCGAAG 67523 Query 47912 GGGTTGGGTGTGTTATACACCCGTGTC-AGGCCCATCTGTTCCAGCAGGTGATCCGCGAC 47970 ||||||| |||| || | | |||| |||| | |||||| | || || || Sbjct 67522 GGGTTGGTGCTGTTGTAGA-TCTTGTCGTTACCCAAAGCAACGAGCAGGCGGTCGGCAAC 67464 Query 47971 GTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGC 48030 |||||||||| | ||||||| | |||||| || ||||| || ||||| | ||| Sbjct 67463 AAACTCGATGTACTGACACATGAGCTTAGCGTTCATTCCGATGAGTGAGACGGGGAGAGC 67404 Query 48031 CTTTGTGAGAAAC 48043 | || ||| || Sbjct 67403 ATCTGCAAGATAC 67391 >seq2123 Length=425399 Score = 219 bits (242), Expect = 8e-52 Identities = 386/559 (69%), Gaps = 9/559 (2%) Strand=Plus/Plus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||| | ||| ||||| || |||||| ||| ||||| ||||| ||||| | ||||||| Sbjct 271638 AGAGAAGGCAAGCAAAATCGGTGTGCATGCCCTCGTCACGGCTAATGAGTTCATTGGAGA 271697 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 | | || ||||| | || | || || | ||||||||| || ||||| || || | Sbjct 271698 ACGTCAATCCGGGCATCAAACCACGCTTCTTCATCCAGAAAATAGCAGCGAACGACCCCG 271757 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGA---AGCGT 48299 |||||||||| ||||| || || ||||| || || | ||| || ||||| ||||| Sbjct 271758 AGAAGAAGATACCCTCGACGGCAGCGAAGGCAACCAGACGCTCACC-AAAGATCGAGCGT 271816 Query 48300 TCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCT 48359 | || |||||||| ||| |||||||| ||||| ||||| ||| || || || | Sbjct 271817 --GTATCGGAGATCCATCGAAGAGCCCAGTCGGCCTTGCGCTTGACGCAGGGGATGGTTT 271874 Query 48360 CTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCT 48419 | | ||| |||||| | | | | | || || || ||||| || || Sbjct 271875 CAACGGCATCGAAGAGGTGTTCCCGTTGGCGAGCATCTTTAATGTAGGTGTCGATGAGGA 271934 Query 48420 TTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGG 48479 || ||| | |||||||| | ||||| || ||| ||||||||||||||| || | Sbjct 271935 GTGAGTATGTTTCAGAGTGAATGTTCTCCATCATGATTTGGAACCCGTAGAAGCACCGCG 271994 Query 48480 CCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCAT 48539 | ||| |||||||||| | ||||| | ||| | |||||||| ||||| ||||||| Sbjct 271995 CTTCAGCAGCCTGCACTTCATTAGAGAAACGCTCGACGAGATTCTCGTTGACAATCCCAT 272054 Query 48540 CTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTT---GTGGGTGA 48596 | ||||| || ||||| || ||||| ||| | |||||| |||||||| || || Sbjct 272055 CAGAAGCGGCGAAGAATGCGAGGACGTGTGAGATGAAATGACGCTCGTTTTCGTTCATGC 272114 Query 48597 GAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACG 48656 | |||||| | || | ||| || ||| |||| ||||| | |||||||| || | Sbjct 272115 GGTTGTTCCAGTCGTGCAAGTCCTTCGACAGATCCATCTCTTCGGCGGTCCAGAATGAGG 272174 Query 48657 CGAGTGCTTTTTTGTACAT 48675 | || || |||||||| Sbjct 272175 CTTCGGCCTTCTTGTACAT 272193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931503025882880