Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2123 208 1e-48 seq2416 138 2e-27 >seq2123 Length=425399 Score = 208 bits (230), Expect = 1e-48 Identities = 398/576 (69%), Gaps = 19/576 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| || |||| |||||||||||||||||| |||||| Sbjct 272202 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCATTCTGGACCGCCGAAGAGATGGATCTG 272143 Query 25537 GCCAAGGACATGGACGGCTGGTA----CGCTCTATCCAAAGACGAGCAGCATTT--TCTC 25590 | |||||| || ||| |||| | ||| | | ||| |||||| ||||| |||| Sbjct 272142 TCGAAGGACTTGCACGACTGGAACAACCGCATGAACGAAA-ACGAGCGTCATTTCATCTC 272084 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 | |||| | |||||||| || || |||||||| || || ||||||||||| |||| Sbjct 272083 A--CACGTCCTCGCATTCTTCGCCGCTTCTGATGGGATTGTCAACGAGAATCTCGTCGAG 272026 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | ||| | | ||||||||| | || || ||| |||||||| ||||| || Sbjct 272025 CGTTTCTCTAATGAAGTGCAGGCTGCTGAAGCGCGGTGCTTCTACGGGTTCCAAATCATG 271966 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGAC 25767 || || || | |||||||| || | || || || || ||||||| ||| Sbjct 271965 ATGGAGAACATTCACTCTGAAACATA---CTCACTCCTCATCGACACCTACATTAAAGAT 271909 Query 25768 G-TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAA 25826 | ||||| | | || | || || | |||| | || ||| ||| || ||||| | || Sbjct 271908 GCTCGCC-AACGGGAACACCTCTTCGATGCCGTTGAAACCATCCCCTGCGTCAAGCGCAA 271850 Query 25827 GGCGCGGTGGGCCATGAAGTGGATCAAC-AGCCAGAGCGCTACGTTTGGCGAGCGGCTGG 25885 ||| ||||| | |||||| | | || || | | ||||| ||||| |||| Sbjct 271849 GGCCGACTGGGCTCTTCGATGGATCTCCGATACA-CGCTCGATCTTTGGTGAGCGTCTGG 271791 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGC 25945 | ||||| ||||| || ||||| ||||| ||| || ||||| || || || |||||| Sbjct 271790 TTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCTCGGGGTCGTTCGCTGCTATTTTCTGGA 271731 Query 25946 TCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACG 26005 | ||| || || |||||||| || || ||||| || ||||| ||| | |||| Sbjct 271730 TGAAGAAGCGTGGTTTGATGCCCGGATTGACGTTCTCCAATGAACTCATTAGCCGTGACG 271671 Query 26006 AGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 |||| | |||| |||||||| ||||| |||| || Sbjct 271670 AGGGCATGCACACCGATTTTGCTTGCCTTCTCTTCA 271635 Score = 84.2 bits (92), Expect = 4e-11 Identities = 121/168 (72%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 26152 GGCATGAACAACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCT-GTG 26210 || |||||| || ||| ||| | || ||||| |||| ||| ||||||| ||||| || Sbjct 271475 GGGATGAACGCCAAACTTATGTGTCAGTACATCGAGTTTGTCGCCGACCGCCTGCTTGTT 271416 Query 26211 CCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACAT 26270 || |||| || || |||||| | | ||||| |||||||| ||||| | || Sbjct 271415 GCAT-TGGGTAACGACAAGGTCTACAACAGCACGAACCCCTTCGACTTCATGGATATGAT 271357 Query 26271 ATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTA 26318 ||| || | || ||||||||||||||||| ||| | ||| ||||| Sbjct 271356 CTCGCTGCAGGGCAAGACCAACTTCTTTGAGAAGCGTGTCTCGGACTA 271309 >seq2416 Length=74831 Score = 138 bits (152), Expect = 2e-27 Identities = 383/576 (66%), Gaps = 25/576 (4%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||| || || || ||| |||||| || ||||| || ||||| Sbjct 66695 ATCTGGCAAATGTACAAAAAAGCAGAAGCATCATTCTGGACTGCGGAAGAAATGGATCTA 66754 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGAC---GAGCAGCATTT----TCT 25589 |||| ||| || ||| |||| || | || ||| |||| || || ||| Sbjct 66755 TCCAAAGACTTGCACGACTGGAACAACCGCATGAATGACAACGAGCGTCACTTCATCTCT 66814 Query 25590 CAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCT-GTGCG 25648 || || | | || ||||| || || || || || || || ||||| || || ||| | Sbjct 66815 CATGTCC----TCGCTTTCTTCGCCGCTTCAGACGGCATTGTTAACGAAAACCTCGTG-G 66869 Query 25649 AGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGG 25708 | | ||| | | ||||| ||| || || || |||||||||||||||||||| Sbjct 66870 AACGTTTCTCAAATGAAGTTCAGGCCGCCGAAGCGCGTTGTTTCTACGGTTTCCAGATCA 66929 Query 25709 CCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAG 25765 || |||||| | || || ||| || || || || || || ||||| | || Sbjct 66930 TGATGGAAAATATTCATTCCGAGACATACTCC---CTCCTCATCGACACCTACATCAAAG 66986 Query 25766 ACG-TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGG 25824 || ||| | | | || | || || | ||| | || ||| || | ||||| | Sbjct 66987 ACCCTCGACAAC-GCGAACACCTCTTCGATGCTGTTGAAACCATTCCTTGTGTCAAGCGT 67045 Query 25825 AAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCT--ACGTTTGGCGAGCGGC 25882 ||||| ||||| | |||||| | | || |||| | || || || || || | Sbjct 67046 AAGGCTGACTGGGCTCTCCGATGGATCT-CGGACA-AGCGTTCAACATTCGGTGAACGCC 67103 Query 25883 TGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCT 25942 | || || ||||| || || || ||||| || ||| |||||| || || |||||||||| Sbjct 67104 TTGTCGCGTTTGCAGCGGTAGAAGGCATTTTCTTCTCCGGTTCATTCGCCGCCATCTTCT 67163 Query 25943 GGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGG 26002 || | ||| || ||| ||||| || || ||| ||||| |||||||||||| | | Sbjct 67164 GGATGAAGAAGCGAGGGCTGATGCCTGGCTTGACCTTCTCCAATGAGCTCATCAGCCGTG 67223 Query 26003 ACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038 ||||||| | |||| || ||||||||||| |||| Sbjct 67224 ACGAGGGCATGCACACCGACTTTGCCTGCCTTCTCT 67259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928815111798080