Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq1986 111 3e-19 seq2206 93.3 8e-14 >seq1986 Length=559288 Score = 111 bits (122), Expect = 3e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || || || ||||| ||||| || || | |||||||||||| ||||| ||||| || Sbjct 252978 ATCCTCCAACTGCTTTCCAGCAAAGATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTT 253037 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 || || || |||| || | || ||| || || ||||||||||| || ||||| || Sbjct 253038 GTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCAAGAGTAAT 253097 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || ||||| || ||||| |||||||| Sbjct 253098 GGTCTTTCCGGTGAGCGTCTTGACAAAAATTTGCAT 253133 >seq2206 Length=69542 Score = 93.3 bits (102), Expect = 8e-14 Identities = 162/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | | ||||| || || || | ||||| |||||| ||| || Sbjct 41273 ATTTGCATACCACCACGGAGACGAAGCACGAGGTGAAGTGTAGACTCTTTTTGAATGTTG 41332 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || | || | | || || | ||| || || || || || | | || || Sbjct 41333 TAGTCAGAAAGAGTACGACCGTCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGG 41392 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 |||||||| || ||||| || || || || |||| || | ||| || || |||||| Sbjct 41393 TCAGGAGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAA 41452 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || | ||| || || ||||| || || || || || || || ||||| Sbjct 41453 GACTCCACCTCCAAAGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 41508 Score = 89.7 bits (98), Expect = 9e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 193164 GTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCG 193223 |||| ||| || ||| ||||||||||| | || | ||| || | || || ||| Sbjct 41084 GTAGACTCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTTCGAGCTGCTTCCCG 41143 Query 193224 GCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTT 193283 || ||||| | | |||||| || ||||| |||||||| || || || || || | || Sbjct 41144 GCGAAAATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCCTGAATCTTTGCCTTC 41203 Query 193284 ATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTT 193343 | || ||| || ||||| ||||| || || || || || || ||||| || || || Sbjct 41204 ACGTTGTCAATGGTGTCGGACGACTCGACCTCCAGGGTAATCGTCTTACCCGTGAGGGTC 41263 Query 193344 TTTACAAATATTTGCAT 193360 || || || |||||||| Sbjct 41264 TTGACGAAGATTTGCAT 41280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899625644796240