Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1986 91.5 3e-13 >seq1986 Length=559288 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| || ||||| || | || || |||| ||||| || || ||||||||||| || | Sbjct 252951 GATGTTGTAATCCGAGAGAGTGCGACCATCCTCCAACTGCTTTCCAGCAAAGATCAAACG 253010 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 |||||||||||| ||||| ||||| || || || || || || || || || | Sbjct 253011 CTGTTGATCAGGGGGTATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGT 253070 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || || || || || ||||||||||| || || || | || || | ||| || || Sbjct 253071 GTCCGAAGACTCAACCTCAAGAGTAATGGTCTTTCCGGTGAGCGTCTTGACAAAAATTTG 253130 Query 192534 CAT 192536 ||| Sbjct 253131 CAT 253133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984447746896950