Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2319 109 2e-18 seq2416 93.3 1e-13 seq2301 86.0 2e-11 seq2123 86.0 2e-11 >seq2319 Length=25589 Score = 109 bits (120), Expect = 2e-18 Identities = 241/358 (67%), Gaps = 10/358 (3%) Strand=Plus/Plus Query 302491 TCAATTCCGTCATCGCCGTAGGAATACTGAATGATTTTGTTCTTGTTATTTCTTACGGTC 302550 || |||||||| || |||||| | ||||||||| | | | |||| || || Sbjct 6365 TCCATTCCGTCTTCACCGTAGACAAACTGAATGAGATCGCCCAAAGAGTTTCGAACTGTA 6424 Query 302551 ATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCA 302610 |||||| | | ||| | || |||| ||| | | ||||||||| || |||||| Sbjct 6425 CCATCATAGCACACCATGACATCCTCCAGTGCCTTCACGAGACGACGCTGGATGTAACCA 6484 Query 302611 GTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAG 302670 ||| | ||||| ||||| |||||||| ||||| | | |||| |||| || |||||| Sbjct 6485 GTTTCGGCGGTTTTGACAGCAGTATCAATCAGACCTTCTCTACCAGCCATGGCGTGGAAG 6544 Query 302671 AATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCG 302730 || | ||| | |||| | || | || | || |||| ||||||||||| || ||| Sbjct 6545 AAGAACTCCTGCGGTGTCAATCCTCGAAGGTACGAATTCTCCACGAAACCACGAGCTTCG 6604 Query 302731 GG---CGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGG 302787 || ||||||| ||| ||||||||||| || || | | ||||| |||| Sbjct 6605 GGACTGAAATCGTC---CTTCGTAAAGTGTGGGAGCGTGCGATGACGGAAGCCGAATGGA 6661 Query 302788 ATACGCTTTCCATCAACGTTCTGCTGTCC--CAGGCACGAAATCATCTGCGAAATATT 302843 ||||| || || || || ||| || || || ||| | |||||| ||||| || Sbjct 6662 ATACGTTTGCCTTCCACAGACTGTTGCCCGACACAGACGGA--CATCTGTGAAATGTT 6717 >seq2416 Length=74831 Score = 93.3 bits (102), Expect = 1e-13 Identities = 246/370 (66%), Gaps = 8/370 (2%) Strand=Plus/Plus Query 133292 GAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATC 133351 |||||||| |||||||| ||| || || || | ||||| |||||||||||| Sbjct 66884 GAAGTTCAGGCCGCCGAAGCGCGTTGTTTCTACGGTTTCCAGATCATGATGGAAAATATT 66943 Query 133352 CATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAA-GCA 133410 ||||| ||||| || || || || || ||||||||||| || || | || || Sbjct 66944 CATTCCGAGACATACTCCCTCCTCATCGACACCTACATCAAAGA--CCCTCGACAACGCG 67001 Query 133411 CAAAC-TATTCAACGCCATT--AGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGC 133467 | || | ||| | || || | | | |||||||| | || || |||||||||| Sbjct 67002 AACACCTCTTCGATGCTGTTGAAACCA--TTCCTTGTGTCAAGCGTAAGGCTGACTGGGC 67059 Query 133468 TATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGT 133527 | | ||||||| |||||||||| | | || | | || || || || ||||| | Sbjct 67060 TCTCCGATGGATCTCGGACAAGCGTTCAACATTCGGTGAACGCCTTGTCGCGTTTGCAGC 67119 Query 133528 AGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGG 133587 ||||| |||||||| ||| ||| | ||| | | || || ||| | || ||||| || Sbjct 67120 GGTAGAAGGCATTTTCTTCTCCGGTTCATTCGCCGCCATCTTCTGGATGAAGAAGCGAGG 67179 Query 133588 TATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACAC 133647 | | ||||| || || || || || || || | ||||||| | ||||| Sbjct 67180 GCTGATGCCTGGCTTGACCTTCTCCAATGAGCTCATCAGCCGTGACGAGGGCATGCACAC 67239 Query 133648 CGAATTTGCC 133657 ||| |||||| Sbjct 67240 CGACTTTGCC 67249 >seq2301 Length=178721 Score = 86.0 bits (94), Expect = 2e-11 Identities = 108/146 (74%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902 |||| ||||||||| ||||| ||||| ||||| ||||||| |||||| | || | Sbjct 98258 CGATTGTCATACGAGACGGAATGGCATGCGGATTAATGATGAGGTCGGGAACAATGCCCT 98317 Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTGTCCG 251961 | |||||||||||||| | || | | |||| | | |||||||| ||||| || ||| Sbjct 98318 CGTTGGTGAAGGGCATATCTTCTTGC-CGATAAGTAATACCAATAGTACCCTTCTGGCCG 98376 Query 251962 TGACGAGAACTGAACTTATCACCAAT 251987 || || ||| ||||| || ||||| Sbjct 98377 TGTCGTGAAGCAAACTTGTCTCCAAT 98402 >seq2123 Length=425399 Score = 86.0 bits (94), Expect = 2e-11 Identities = 222/331 (67%), Gaps = 8/331 (2%) Strand=Plus/Plus Query 133292 GAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATC 133351 || || ||| |||| ||||| || |||||||| | || ||| ||||||||| ||| Sbjct 273493 GAGGTGCAAGTGGCAGAAGCGCGATGTTTTTATGGTTTCCAAATTATGATGGAAAACATC 273552 Query 133352 CATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAA--GC 133409 || || |||| ||| ||| || || || |||||||||| ||| | ||| || Sbjct 273553 CACTCCGAGGCATACTCTCTTCTCATAGACACCTACATCAAAG--ACCCAACCGAACGGC 273610 Query 133410 ACAAACTATTCAACGCCATTAGCGA-ATTTCCTTGTATTAAAAAGAAATCTGACTGGGCT 133468 | | || || |||| | ||| | ||||||| || | ||| |||||||||| Sbjct 273611 AATATCTGTTTGACGCGA-TAGAAACCATTCCTTGCATCCGACGGAAGGCTGACTGGGCA 273669 Query 133469 ATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTA 133528 || ||||| ||| || | | ||||||| ||| | || ||||| |||| Sbjct 273670 ATCCGCTGGATATCGGATAAACAAACATCTTTTGCTGAACGTTTGGTGGCTTTCGCTGCG 273729 Query 133529 GTAGAGGGCAtttttttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGG 133587 || ||||| || |||||| || | || ||| || || |||||| | || ||||| || Sbjct 273730 GTGGAGGGAATCTTTTTCTCCGGCTCCTT-TGCTTCCATATTTTGGATAAAGAAGCGAGG 273788 Query 133588 TATTCTACCTGGACTGTGTTTTTCTAACGAA 133618 | || | || |||||| | ||| |||||| Sbjct 273789 TCTTATGCCAGGACTGACCTATTCCAACGAA 273819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471769380955709