Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1986 125 6e-24 seq2206 118 1e-21 >seq1986 Length=559288 Score = 125 bits (138), Expect = 6e-24 Identities = 155/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || ||||| ||||| || || ||||| || || || || | | Sbjct 253133 ATGCAAATTTTTGTCAAGACGCTCACCGGAAAGACCATTACTCTTGAGGTTGAGTCTTCG 253074 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| ||||| || |||||| Sbjct 253073 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATACCCCCTGATCAA 253014 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || |||||||||||||| || || ||| |||||||| | | | || ||||| ||| Sbjct 253013 CAGCGTTTGATCTTTGCTGGAAAGCAGTTGGAGGATGGTCGCACTCTCTCGGATTACAAC 252954 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGTG 24913 || || ||||| ||||| || || ||||||| Sbjct 252953 ATCCAGAAGGAGTCGACTCTTCACCTTGGTG 252923 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || ||||||| ||||| || ||||||||||| || | | Sbjct 253361 ATGCAAATCTTCGTGAAGACTTTAACCGGAAAAACGATAACGCTCGAAGTCGAGTCTTCG 253302 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | ||||| ||||| || ||||| ||||| || || || || || Sbjct 253301 GACACCATCGACAATGTAAAGGCCAAGATTCAGGACAAGGAAGGCATCCCCCCTGACCAG 253242 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || ||||| || |||||||| || ||| | | | | || ||||||||| Sbjct 253241 CAACGTCTTATTTTTGCTGGAAAACAGCTCGAAGATGGCCGTACCCTCTCCGATTATAAC 253182 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || || || ||||| || ||| | || | || | || |||||| Sbjct 253181 ATCCAGAAAGAGTCGACCCTTCACCTTGTCCTCCGTCTTCGTGGAGGC 253134 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | ||||| || || ||||| || || || || | | Sbjct 253636 ATGCAGATCTTTGTGAAGACTTTGACCGGAAAGACCATTACACTTGAGGTCGAGTCGTCG 253577 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | ||||| |||||||| ||||| || || || || || || || Sbjct 253576 GATACTATCGACAACGTAAAGGCCAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 253517 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || || || || || ||||| || ||| | | | | || ||||| ||| Sbjct 253516 CAACGTCTTATTTTCGCTGGAAAGCAGCTCGAAGATGGTCGTACCCTCTCCGATTACAAC 253457 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGT 24912 || || ||||| || || || || |||||| Sbjct 253456 ATCCAGAAGGAGTCAACTCTTCACCTTGGT 253427 >seq2206 Length=69542 Score = 118 bits (130), Expect = 1e-21 Identities = 153/210 (73%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || ||||| || ||||| || || || || | || Sbjct 41280 ATGCAAATCTTCGTCAAGACCCTCACGGGTAAGACGATTACCCTGGAGGTCGAGTCGTCC 41221 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||| || ||||| |||||||| |||||||| ||| Sbjct 41220 GACACCATTGACAACGTGAAGGCAAAGATTCAGGACAAGGAAGGAATTCCTCCCGACCAA 41161 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || || |||||||| ||||| || ||| | | | | || || |||||| Sbjct 41160 CAGCGTCTCATTTTCGCCGGGAAGCAGCTCGAAGATGGGCGTACTCTTTCCGACTATAAC 41101 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGT 24912 ||||| ||||| || || || || |||||| Sbjct 41100 ATTCAGAAGGAGTCTACTCTCCACCTTGGT 41071 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || ||||| || || || | || || || | || Sbjct 41508 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACTTTGGAGGTGGAGTCTTCC 41449 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| ||||| || ||||| || || Sbjct 41448 GACACCATCGACAATGTGAAGGCCAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAG 41389 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| ||||||| || || || || || ||||| | | | || || || ||| Sbjct 41388 CAACGTCTGATCTTCGCTGGCAAGCAACTCGAGGACGGTCGTACTCTTTCTGACTACAAC 41329 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 |||||||| || || ||||| ||| | ||| Sbjct 41328 ATTCAAAAAGAGTCTACACTTCACCTCGTG 41299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449883220147960