Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2519 125 6e-24 seq1986 98.7 8e-16 >seq2519 Length=216263 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34345 CACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGG 34404 ||||| ||||||||| ||||| || || || || || | | || |||||| Sbjct 89043 CACAAGACAAACTTGTCAATGAAGCCGTCGAGAAGTTCTCGAAGGCGGTTGGCGTCGTGA 89102 Query 34405 GAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCG 34464 | ||||||||||||| | |||||||| || | ||||| || ||||| || |||||| Sbjct 89103 GCGCCGTTGACGATGTAGCGTTCGTTCTTTTCATCGAAGGAGGTCTGCGCACCGAGCTCG 89162 Query 34465 CACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGC 34524 || || ||| |||| || || || | | ||||| | || ||| | |||| || | | Sbjct 89163 CAGCCAAAGAACTTGGTGGGATACGTTGGGGGACGGCTGAGAGCCCTAGCGACATCAGCC 89222 Query 34525 ATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGG 34573 |||||| |||||| |||||||| || || ||||||||||||| |||| Sbjct 89223 ATGTTGGGGATGACGGTCTTGATACCATTTCCCTTTCCTTCGATTTTGG 89271 >seq1986 Length=559288 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || || || ||||||||||| ||||| || || ||||| ||| || Sbjct 253361 ATGCAAATCTTCGTGAAGACTTTAACCGGAAAAACGATAACGCTCGAAGTCGAGTCTTCG 253302 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | ||||| |||||| ||||| |||||| | ||| || || Sbjct 253301 GACACCATCGACAATGTAAAGGCCAAGATTCAGGACAAGGAAGGCATCCCCCCTGACCAG 253242 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||||| ||| || |||||||| || |||| | | || | | ||||| ||| Sbjct 253241 CAACGTCTTATTTTTGCTGGAAAACAGCTCGAAGATGGCCGTACCCTCTCCGATTATAAC 253182 Query 110453 ATTCAAAAAGAATCTAC 110469 || || ||||| || || Sbjct 253181 ATCCAGAAAGAGTCGAC 253165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412828734436601